Gene Gmet_0398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_0398 
Symbol 
ID3739376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp440319 
End bp441488 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content63% 
IMG OID637777671 
Productputative RNA methylase:THUMP 
Protein accessionYP_383366 
Protein GI78221619 
COG category[L] Replication, recombination and repair 
COG ID[COG0116] Predicted N6-adenine-specific DNA methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0174402 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones82 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGATCA TCAGGAGAAA AGCAGCGGCC GGACCCTTCG TCGGCGAGCA GTCATTCTTT 
GCCACCACCG CCAAGGGGGT GGAGGAGGTG CTTGCTCGGG AGATGACCAG CCTCGGCCTC
GGCGGAGTGA CCATGGATAA GGGGGGAGTC CGTTTCACGG GGGATCTTTC CGCCTGCTAC
CGGGCCAATC TCTGGCTCAG GACCGCGAGC CGCATCCTTA TCACCCTGAC CGAATTTCCG
TGCCACTCGC CTCAGGATCT CTACGACGGG GTCCGTGCCC TCCCCTGGGA CCGCTATCTC
ACCCCTGACA CGACCCTTGC CGTTGAATGC GTGCTGCGCG ATTCGGCCCT CACCCACTCG
GGGTTTGTGG CCCTCAAGAC CAAGGATGCC ATTGTTGATA CCCTCCGGGA CCGGTTCGGA
CGCCGCCCCA GCGTGAATCC CAAGGATCCC GATCTCCTGG TGAATGTCCA TTTAGTCCGC
AACCGTTGCA CCATCAGTCT CGACAGTTCC GGCACCGGAC TTGACCGTCG CGGGTACCGG
GCCGAGGCCG GCGAGGCTCC TTTGCGGGAG ACCCTGGCCG CGGCCCTTGT GCTTCTCACC
GATTGGGATG GGACGGTTCC CTTGGTCGAC CCCCTCTGCG GCTCCGGGAC GATTCTCATA
GAGGCAGTCC TCAAGGCCTT GAACCGAGCG CCCGGGCTTG TCAGGGAGCG CTTCGGGTTC
CAGCGCTGGC CAGCCTTTGA TGTCCCCCGT TGGCGGCGTC TCCTTGAGGA GGCGCGGCAG
ACGGAGCGGA CAACACTTGC CGTGCCCATT CTCGGCAGCG ACCGTCTGGA GGATGTTCTT
GCCGTGGCCC GTGGCAACAG TCGCCGCGCC GGCGTCGAGA AGTTCATCTC CTTTGAGGCG
CGGGACCTGC GAGATCTCGT TCCGCCTCCT GCGCCGGGAG TCATCCTTAC GAATCCTCCC
TACGGCCGGC GTCTGGGTGA TGAGGAACAA CTGAAATCCT TTTATCGCCA GATCGGTGAT
GTCTTCAAAC AGCGCTGCGC CGGGTACACT GCCTGGCTGT TCACGGGGAA CCTTGACCTC
GCCAAGGAGG TAGGACTCAA GGCCTCCCGC AGGATTGCTC TTTTCAACGG CCCCCTCGAC
TGCCGACTCT TGAAGTATGA TCTGTACTGA
 
Protein sequence
MTIIRRKAAA GPFVGEQSFF ATTAKGVEEV LAREMTSLGL GGVTMDKGGV RFTGDLSACY 
RANLWLRTAS RILITLTEFP CHSPQDLYDG VRALPWDRYL TPDTTLAVEC VLRDSALTHS
GFVALKTKDA IVDTLRDRFG RRPSVNPKDP DLLVNVHLVR NRCTISLDSS GTGLDRRGYR
AEAGEAPLRE TLAAALVLLT DWDGTVPLVD PLCGSGTILI EAVLKALNRA PGLVRERFGF
QRWPAFDVPR WRRLLEEARQ TERTTLAVPI LGSDRLEDVL AVARGNSRRA GVEKFISFEA
RDLRDLVPPP APGVILTNPP YGRRLGDEEQ LKSFYRQIGD VFKQRCAGYT AWLFTGNLDL
AKEVGLKASR RIALFNGPLD CRLLKYDLY