| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0369 |
|---|
| Symbol | |
|---|
| ID | 3739735 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 412399 |
|---|
| End bp | 413187 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637777642 |
|---|
| Product | NADH ubiquinone oxidoreductase, 20 kDa subunit |
|---|
| Protein accession | YP_383337 |
|---|
| Protein GI | 78221590 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I)
[COG3260] Ni,Fe-hydrogenase III small subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 0.639701 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 79 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAAGG CACTCTTTGC CAGACGTCAC CAGGGACACC GAACCATCGC CTACCCCGCT
GGGCCGGCGC AACTGCCGGA ACTCTTCCGG GGGGCCCCCT TCCTGGATCC GGAAATGTGT
CCCGGCGGGT GCGCCGACTG TGCCAACGCC TGTCCTCATG GCGCCATAAC GGCCGGGACC
GGGGACCAGG GACCGGGGAC CGGGAAAACC CTCGCCCTCG ACATGGGGAA ATGCCTCTTC
TGCCCTGAAT GCGCCGGCGC CTGCCCCCAC GGCGCCATCT CTTTCACTGG CGATCACCGG
CTGGCCGTTA ACCGGCGGGA GGACCTCATC GTCCGGTCCG GAGAGGTCCG GAGGCTCGCC
CCCCCCCTGG ACGCGACGCG ACAATTCCTC TTCAGCCACT CCCTCAAGCT CCGCGAGGTC
TCGGCAGGGG GGTGCAACGC CTGCGAGGCC GACACCAACG TCCTCTCCAC CGTCGGCTTT
GACCTGGGGC GCTTCGGCAT CCAGTTCGTT GCCTCCCCCC GCCATGCCGA CGGCATCTTC
ATCACCGGCC CGGTTACCGA GAACATGCAC CTCGCCCTCC TCAAGACCTG GGAGGCGATC
CCCGAGCCGA AAATCGCCAT CGCCGCCGGG GCCTGCGCCA TCAACGGTGG TCCCTTCATC
GACTCCCCCG ATGTTCACAA CGGCGCCGAC GGCCTCATCC CCATCGACCT CTACATCCCC
GGCTGTCCAC CCCACCCCCT CACCATCCTC GACGGTCTCC TGCGGATCTT GGGGAGGCTG
GAGGAGTAG
|
|---|
| Protein sequence | MLKALFARRH QGHRTIAYPA GPAQLPELFR GAPFLDPEMC PGGCADCANA CPHGAITAGT
GDQGPGTGKT LALDMGKCLF CPECAGACPH GAISFTGDHR LAVNRREDLI VRSGEVRRLA
PPLDATRQFL FSHSLKLREV SAGGCNACEA DTNVLSTVGF DLGRFGIQFV ASPRHADGIF
ITGPVTENMH LALLKTWEAI PEPKIAIAAG ACAINGGPFI DSPDVHNGAD GLIPIDLYIP
GCPPHPLTIL DGLLRILGRL EE
|
|---|
| |