Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_0358 |
Symbol | |
ID | 3739724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 402798 |
End bp | 404156 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637777631 |
Product | multi anti extrusion protein MatE |
Protein accession | YP_383326 |
Protein GI | 78221579 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000000377442 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGGAA GAGGATTTAC GACACGACAC TTCAGGGAGC GGAAAAAGCG GATCTCCATC CGCCGCAATG TCATGAACCT GTCGCTTCCG GTCCTCCTCT CGTCCCTCTT CCAGCGTCTC GTGGCCATCG TCGACATCTT CCTCGTGGGG GGGCTCGGCG CAGCGGCCAT CGCGGCCACG GGGCTCGGCC AGCTCCTCGT CTTCGTGACC ATGACGGTCT TCTGGGGGCT TGCCACTGGC ACCACGGTGG TGATCGCTCA CCTCTGGGGA GCGGGACAGC GCCGGGAAGC CCGCCGGGCC GCCTTTGCCG CCTGCCTCGC CTGTGCCGCC ATGACGGCGG CGGCCTCGAC CTTGGGGTGG TTCTTCAGCG GCGATCTGGC CGCCTTTCTC GGCGCGAAGG ATGACGTCCT CCACCTGGCC GCCGGCTATA CCCGGCTGGT CTTTCTCTAT CTGGCCTTCA CCACGGGGCT CAACATCCTC TCGGCCATCA TGCACGGCAC CGGCAACACC CGGACCCCCA TGACCGCCAT TCTCCTTGTG AATGTCCTCC ACGTGCTCAT GGCCTGGCCC CTCATCTACG GCAAGCTGGG TCTCCCCGCC ATGGGGGTGA CCGGCGCGGC CATCGCCATC AACGCCTCCG AGGCCATCGG CTTTTTCTAC CTCCTGATCC AGGCCATGAG ACTCCGCTAT ATCCGGGTGG GGCGCCCCGA CACGGGGCTC TTCCAGCGCA TCTGGCGGGT GGGGTGGCCC GTGGCCCTGG AGCGGGTCGC CCAGCAGGGA GGGCAGCTCT TCTACTCGAA ATTCATCATC AGCTACGGCA CCGCCGCCTA CGCGGCGCAC CAGATCGGGC TCTCCATCGA GTCCCTCTCC TTCATGCCCG GGGCCGGCAT GGGGATCGCC GCGGCCACCC TCATGGGGCA GGCCCTCGGA GCAAAAAAAT ACCGCCGGGC GCGGATCAGC CACCGTGAGG CGCTGCGTCT GGCGGTCATG GTGATGGGGA CCATGGCGGC CGTCTTCCTG ACGCTGCCCG GGCCCCTCAT CGGACTCTTC ACCCATGACC CGGCGGTCAT CGAGAAGGGA ATCGTCTTCC TGCGGCTGGT GGCCTTCGCC CAGGTCCCCC TGGCCCTCTC CTTCGTCTAC GCCGGGAGCC TGCGGGGGAC CGGCGACACC TTCTACGTCT TCCTGGTGAC CCTCGGCACC ATGTGGGGGG TGCGGGTCTT CCTCTCATGG GTGGCGGCCG ACTGGCTCCA CCTCTCCCTC TACGCCGTCT GGGGGGTCTT CGTCATCGAC TGGTACGCGA GGGCCGTCGC CTTCTGGTGG CGGTACCGGC AGCGGGACCT CCACGCGGTA GTCATCTGA
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Protein sequence | MTGRGFTTRH FRERKKRISI RRNVMNLSLP VLLSSLFQRL VAIVDIFLVG GLGAAAIAAT GLGQLLVFVT MTVFWGLATG TTVVIAHLWG AGQRREARRA AFAACLACAA MTAAASTLGW FFSGDLAAFL GAKDDVLHLA AGYTRLVFLY LAFTTGLNIL SAIMHGTGNT RTPMTAILLV NVLHVLMAWP LIYGKLGLPA MGVTGAAIAI NASEAIGFFY LLIQAMRLRY IRVGRPDTGL FQRIWRVGWP VALERVAQQG GQLFYSKFII SYGTAAYAAH QIGLSIESLS FMPGAGMGIA AATLMGQALG AKKYRRARIS HREALRLAVM VMGTMAAVFL TLPGPLIGLF THDPAVIEKG IVFLRLVAFA QVPLALSFVY AGSLRGTGDT FYVFLVTLGT MWGVRVFLSW VAADWLHLSL YAVWGVFVID WYARAVAFWW RYRQRDLHAV VI
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