Gene Gmet_0354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_0354 
Symbol 
ID3739720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp395316 
End bp397841 
Gene Length2526 bp 
Protein Length841 aa 
Translation table11 
GC content62% 
IMG OID637777627 
Productpenicillin-binding protein 1A 
Protein accessionYP_383322 
Protein GI78221575 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5009] Membrane carboxypeptidase/penicillin-binding protein 
TIGRFAM ID[TIGR02074] penicillin-binding protein, 1A family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.75585 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.103015 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCTG CCAGCGGCAG ACAGAACATT GACCCCCGGA ATGTAAACCG GCGGAGAGAC 
AAAAATCCAT GGAAAGTTGT CGTCATAACG CTCGTTACCC TTGGTGTTGT GGCCCTTCTC
GCTGTGTTCG GCTATTTCAC CTATCTTTAC GCCTCCCTGC CGAAGGTCGA CCGTCTTGCC
GACTACCGGC CTCCCATTGT TTCCCAGGTC TTTGGCGATG ATGGCAGCCT TGTTGGGGAG
TTTTACCTGG AGCGGCGCAT CGTCGTGCCG GTGGAGAAAA TTCCCCGGAA GCTGATCCAG
GCTTTCGTGG CGGCCGAGGA TTCCAACTTC TACCAGCACA AGGGGCTCGA TTACCTGGGG
ATCGCCCGGG CCGCGGTGAA AAACCTCCTC GCTATGCGGA AGAAGGAGGG GGCGTCCACC
ATCACCCAGC AGGTGGCGAA GTCGATGCTT CTCACCTCCG AGAAGAGTTT TGCCCGCAAG
TTCAAGGAGG CGATTCTTGC CACTCGCATG GAGAAGATGC TCTCCAAGGA CGACATCCTC
TACATCTACC TGAACCAGAT CTATCTGGGG GGAGGCGCCT ACGGGGTCCA GGTGGCTGCC
GAGACCTACT TCGGCAAGAA CGTGGAGCAG CTGAACCTGG CCGAGATGGC CATGCTCGCC
GGGCTCCCCA AGGCCCCCAA CTCCTACTCT CCCATCAAGC ACCTGGACCG GGCCCGGGAA
CGGCAGGCCT ACGTCCTTGA GCGGATGGTA AGGGAGGGGT ACGTGACCCA GGCCGAGGCG
GACCACGCCC GGGCGACCCC CATCGTGGTC AGGTCCATGA AGAAGGTAAA CAGCGAGCAG
TCGGCCTATT TCCTTGAGCA TATCCGGATC AAGCTGGAGG AGACCTATGG GATGGACCGG
CTCTACAAGG AAGGGCTGAA GATCTACACC ACCATGAATG CCGAGATGCA GAAGGGGGCC
TTTGATGCGG TGGTGAACGG CCTGAAAAAC GTGGACAAGC GCCAGGGGTT CCGGGGAGCG
GTCAAGTACC TTGGGGAAAC CGAGGTGGAT ACCTTCAGTA AGAAAGTGGA AGACGGGATC
GATACCGCGT CCCTCAAGCA GGGGAGCACC TACCAGGGGG TCGTCACCGC CGTGGATCCG
GCAAAGGGGG ATGCAACCGT GCGGGTTGGA GACCGGACCG GCACCATCTC CCGCAAGAAC
ATGGCCTGGG CCGGCAAGGT GCAGCTTGTG AACGCCTGGG GCAAGCAGGA CGGGAAAGGG
AAGTCGCTCC CCTTGGGGAG CGTTGTCTTC GTTTCGGTGC TCACCCCTGA TGTGAACAAG
CAGGGGGCCA TCTTCTCCCT GGACCAGGAG CCCGAGGCCC AGGCGGCGGT GGTGGCCCTT
GATCCCCTGA CCGGTGCCGT GAAGGCCATG GTTGGCGGGT ATGATTTCCG CAGGAGCCAG
TTCAACCGGG CCGTCCAGGC AAAGCGGAAT CCCGGCTCTG CCTTCAAGCC GATCATCTAC
GCCGCCGCCC TCGACAAGGG GCTCACGGCG GCAACAACCT TCGACGACTC CCCCGTCGAA
TACGAGGGGG GCGGGGACAA GGCCTGGAAA CCGAAAAACT ACGACAACAT CTATCGGGGC
ATCGTGACCA TGCGCGAAGC CCTCACCAAT TCCATCAACG TGGTGAGCGT CAAGATTCTG
GAACAGATCG GCGTCGGCGC TGCCATCGAC TATGCCAAAA AACTCGGCAT CACCTCCCCC
CTGGCCGCCA ACCTTACCCT GGCCCTCGGT TCGTCCAGCG TGACCCCCCT TGAATTGACC
TCCGCCTACG CCGTATTCGC CTCGGGAGGG TACCGGACAA CGCCTTACTT CATCACCAAA
GTGGAGGATG CCGACGGCAA GGTTTTGGAG GAGACGGCAC CGCCGGTCAT TCCGACCTTC
ACCAACCAGA GCACGGCCAC CCTCACCAAT GCAGACCTCC CACCCGCAAC GGGCGCCGTT
CCCGGGGGGG GAGCGGTACC GGCCATTGCG CCCGAAACCG CCTACATCAT CACCAATCTC
ATGGAGAGCG TCGTCACGAG CGGCACCGGC CAGCGGGCCC GGGCCCTGGG CCGCCCCGTG
GCGGGAAAGA CCGGCACCAC CAACGACATG AAGGACGCCT GGTTCGTGGG CTATGTGCCG
CAGCTGGTGG CCGGGGTCTG GGTGGGGTAC GATCAGGAGC GCTCCCTTGG CGCCGGAGGG
TCGGGCGGGC AGGCCGCGGC ACCCATCTGG ACCGAGTTCA TGCAGCGGGC CCTGGCGGGT
ATCCCCGTGA AGAACTTTAT CCAGCCGGCG GACATCACGT TTGCCACCAT CAATGTCCGC
ACCGGACGCC TGGCCCGGGA AGGGAGTCCG GGGGCGACTC AGGAGTGCTT TGTCGCCGGT
ACCGAGCCCA CGGCGTACGA TGGCGAGCAG GATACACCCA CCACCGAAGA AAATGCCAGC
GATTCCGATG GGTTGCCGGA ATGGGTGCGC GCTGGGCGTC TGCCGCGACG GTCCGAAAGT
CGCTAA
 
Protein sequence
MTPASGRQNI DPRNVNRRRD KNPWKVVVIT LVTLGVVALL AVFGYFTYLY ASLPKVDRLA 
DYRPPIVSQV FGDDGSLVGE FYLERRIVVP VEKIPRKLIQ AFVAAEDSNF YQHKGLDYLG
IARAAVKNLL AMRKKEGAST ITQQVAKSML LTSEKSFARK FKEAILATRM EKMLSKDDIL
YIYLNQIYLG GGAYGVQVAA ETYFGKNVEQ LNLAEMAMLA GLPKAPNSYS PIKHLDRARE
RQAYVLERMV REGYVTQAEA DHARATPIVV RSMKKVNSEQ SAYFLEHIRI KLEETYGMDR
LYKEGLKIYT TMNAEMQKGA FDAVVNGLKN VDKRQGFRGA VKYLGETEVD TFSKKVEDGI
DTASLKQGST YQGVVTAVDP AKGDATVRVG DRTGTISRKN MAWAGKVQLV NAWGKQDGKG
KSLPLGSVVF VSVLTPDVNK QGAIFSLDQE PEAQAAVVAL DPLTGAVKAM VGGYDFRRSQ
FNRAVQAKRN PGSAFKPIIY AAALDKGLTA ATTFDDSPVE YEGGGDKAWK PKNYDNIYRG
IVTMREALTN SINVVSVKIL EQIGVGAAID YAKKLGITSP LAANLTLALG SSSVTPLELT
SAYAVFASGG YRTTPYFITK VEDADGKVLE ETAPPVIPTF TNQSTATLTN ADLPPATGAV
PGGGAVPAIA PETAYIITNL MESVVTSGTG QRARALGRPV AGKTGTTNDM KDAWFVGYVP
QLVAGVWVGY DQERSLGAGG SGGQAAAPIW TEFMQRALAG IPVKNFIQPA DITFATINVR
TGRLAREGSP GATQECFVAG TEPTAYDGEQ DTPTTEENAS DSDGLPEWVR AGRLPRRSES
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