Gene Gmet_0351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_0351 
SymbolileS 
ID3739717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp390868 
End bp393639 
Gene Length2772 bp 
Protein Length923 aa 
Translation table11 
GC content64% 
IMG OID637777624 
Productisoleucyl-tRNA synthetase 
Protein accessionYP_383319 
Protein GI78221572 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0060] Isoleucyl-tRNA synthetase 
TIGRFAM ID[TIGR00392] isoleucyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.00519923 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAATATA AGAATACCCT CAATCTGCCG GTCACCGATT TTCCCATGAA GGCCAATCTT 
CCCCAGCGGG AACCGGAGAT CCTCGCCGGC TGGCAGAAGA ACGATCTCTA CGGCAAGCTC
ACCGCGGCAG GGGAGGGGAA GCCCCGCTAC GTCCTCCACG ACGGCCCCCC CTACGCCAAT
GGCCACATCC ACATCGGCCA TGCCCTCAAC AAGATCCTCA AGGACATCAT TCTCAAGAGC
AAGCGGATGC AGGGGTTTGA CGCCCCCTAC GTGCCGGGGT GGGACTGCCA CGGCCTCCCC
ATCGAGCTCC AGGTGGAGAA AAATCTGGGG TCCAAGAAGC ATGAGACCAC CAAGCTCCAG
ATGCGAAAAC AGTGCCGGGA ATACGCCGAA AAATTCGTGA AGATCCAGCG GGATGAATTC
GAGCGGCTGG GAGTCATCGG CGACTGGGAC CGTCCCTACC TCACCATGAC CCATGACTAC
GAGGGGATCA CCGCCCGGGA ACTGGCCCGC TTCGCCGCCA ATGGCGGCCT CTACAAGGGG
AAGAAGCCGG TCCACTGGTG CTCCTCCTGT GTCACCGCAC TGGCGGAAGC CGAGGTGGAG
TACGCCGACA AGACCTCCCC CTCCATCTAC GTGAAATTTC TCCTCCAGGA TGACATCAGC
GCCTCGGTGC CGGCCTTGGC CGGAAAGAAG GTGTCCCTGG TCATCTGGAC CACCACTCCC
TGGACCATCC CGGCCAACCT GGCCGTGGCC CTCCACCCGG AGCTGGAGTA CGTGGCCCTG
GAGGCCGGCG GCGAGGTGCT CGTGGTGGCC GAGGGGCTCA AGGATGCCTT CATGGCCGCC
ACCGGCGTGC AGGGGAGTGT CATCGCCACT TTCCGGGCCG ACATTCTCTA CCGGAAGCGG
TGCAAGCATC CCTTCTACGA CCGGGATTCC ATTGTCCTCC TGGGTGAGCA CGTGACCCTG
GACGCCGGTA CCGGCTGCGT CCACACCGCC CCGGGCCACG GCCAGGAAGA CTACGAGCTG
GCCCTGGTGG AAGGGCTCGA CATCTACAAC CCGGTGGACA ATCGGGGGCG CTACATCCAG
AGCCTGGAAT TCTTCGGCGG CCAGTTCGTC TTCGACGCCA ACGCCACGGT CATCGAGAAG
CTCCAGGAGG TGGGGGCCCT GGTGGGGCAG GGGAGCGTGG AGCACTCCTA CCCCCACTGC
TGGCGCTGCA AGAAACCGAT CATCTTCCGG GCCACGGAGC AGTGGTTCAT CTCCATGGAG
AAAAACGACC TGCGGAAGAA GGCCCTGGAG GAGATCGACC GGGTCTCCTG GGTGCCGAAA
TGGGGACGCG AGCGGATCCA CGGCATGATC GAGAACCGTC CCGACTGGTG CATCTCCCGG
CAGCGCTCCT GGGGGGTTCC CATCACCGCC TTCTACTGCA CGGAGTGCGG CGAGATTCTG
GCCGACGGCA CGATCATGCA CCACGTGGCC GATCTCTTCA TGGAGGGGGG GGCCGACCTC
TGGTACGAAA AGGAGGCTGC CGAGCTCCTC CCGCCGGGGA CCGTCTGCCC GCAGTGCGGC
AAGAGCGCCT TCGAGAAGGA GATGGATATT CTGGACGTCT GGTTCGATTC CGGGGTTTCC
CACGCCGCGG TCCTGGAAAA CCGCCCCGAG CTCGGCTCGC CGGCCAACAT GTACCTTGAG
GGGAGCGACC AGCACCGGGG GTGGTTCCAC TCGTCACTCC TGGCCTCCGT CGGGACCCGT
GGCACCGCAC CGTACAAGGA GGTCCTCACC CACGGCTTTG TGGTGGACGG CTCCGGCCGC
AAGATGAGCA AGTCGGTGGG GAACGTGGTG GCCCCCGAAG AGGTGATCAA AAAGTACGGC
GCCGAGATCC TCCGCCTCTG GGTGGCGGCC CAGGACTACC GGGACGACGT CCGGATTTCC
CAGGAGATCC TCACCCGCCT GGCCGAGGCC TACCGCCGGA TCCGCAACAC CTGCCGCTAC
CTCCTCGGGA ACCTCTACGA CTTCGACCCG GCCACCGACA TGGTCCCCTT CGGGGAAATG
ACGGAACTGG ACCGCTGGGC ACTGCACCAG TTGGAGGTGC TCAAGGAGAA GGTTTTCACC
GCCTACAACG AGTACGAGTT TCACATCCTG TACCACGCCG TGAACGGCTT CTGCACCGTG
GAGATGAGCG CCTTCTACCT CGACATCATC AAGGAGCGCT ACACGAGCCG GAAAGACTCT
CCGGAGCGCC GCAGCGCCCA GACCGTCATG TATCTCGTGC TGGAATCCCT GGTGCGGCTC
ATGGCGCCGG TCCTCTCTTT CACCGCCGAC GAGGTCTGGG GATACATGCC GAAGCGGGCC
GAGGCGAGTG TCCACCTGGC GTCCTTCCCG GAGCTCTGTC CCGAGCGGAA AGACGAGGCC
CTGGTGGAGC GGTGGGCGCG GACCATGGCG GTGCGGGGCG ATGTCTCCAA GGCCCTGGAA
CAGGCCCGGG TGCAGAAAAC CATCGGCCAC TCCCTCGACG CGGCAGTGAC CCTGTCCGCC
GAGCCCGAAC TGCTTGGGTT CCTGAAGGAG TACGCCGGGG AACTGGCCAC GGTTTTCATT
GTCTCGAAGG TGGAGCTGGT GGGGGAGATC GCCGGCGAGT TCGTGGAGGC TGAGGGGGTG
AAGGGGCTGA AGATCGGCGT CACCGCGGCC CCGGGCGACA AGTGCGAGCG GTGCTGGCAC
TATGACGAGG AAATCGGTGG CGATGCCGAG CATCCGACCC TCTGCCCCAA GTGCGTTGCG
GCGGTCAAAT AG
 
Protein sequence
MEYKNTLNLP VTDFPMKANL PQREPEILAG WQKNDLYGKL TAAGEGKPRY VLHDGPPYAN 
GHIHIGHALN KILKDIILKS KRMQGFDAPY VPGWDCHGLP IELQVEKNLG SKKHETTKLQ
MRKQCREYAE KFVKIQRDEF ERLGVIGDWD RPYLTMTHDY EGITARELAR FAANGGLYKG
KKPVHWCSSC VTALAEAEVE YADKTSPSIY VKFLLQDDIS ASVPALAGKK VSLVIWTTTP
WTIPANLAVA LHPELEYVAL EAGGEVLVVA EGLKDAFMAA TGVQGSVIAT FRADILYRKR
CKHPFYDRDS IVLLGEHVTL DAGTGCVHTA PGHGQEDYEL ALVEGLDIYN PVDNRGRYIQ
SLEFFGGQFV FDANATVIEK LQEVGALVGQ GSVEHSYPHC WRCKKPIIFR ATEQWFISME
KNDLRKKALE EIDRVSWVPK WGRERIHGMI ENRPDWCISR QRSWGVPITA FYCTECGEIL
ADGTIMHHVA DLFMEGGADL WYEKEAAELL PPGTVCPQCG KSAFEKEMDI LDVWFDSGVS
HAAVLENRPE LGSPANMYLE GSDQHRGWFH SSLLASVGTR GTAPYKEVLT HGFVVDGSGR
KMSKSVGNVV APEEVIKKYG AEILRLWVAA QDYRDDVRIS QEILTRLAEA YRRIRNTCRY
LLGNLYDFDP ATDMVPFGEM TELDRWALHQ LEVLKEKVFT AYNEYEFHIL YHAVNGFCTV
EMSAFYLDII KERYTSRKDS PERRSAQTVM YLVLESLVRL MAPVLSFTAD EVWGYMPKRA
EASVHLASFP ELCPERKDEA LVERWARTMA VRGDVSKALE QARVQKTIGH SLDAAVTLSA
EPELLGFLKE YAGELATVFI VSKVELVGEI AGEFVEAEGV KGLKIGVTAA PGDKCERCWH
YDEEIGGDAE HPTLCPKCVA AVK