| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0329 |
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| Symbol | |
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| ID | 3740627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 365418 |
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| End bp | 368993 |
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| Gene Length | 3576 bp |
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| Protein Length | 1191 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637777602 |
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| Product | nitrate reductase, alpha subunit |
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| Protein accession | YP_383297 |
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| Protein GI | 78221550 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG5013] Nitrate reductase alpha subunit |
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| TIGRFAM ID | [TIGR01580] respiratory nitrate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.244606 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0000000648576 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACACAGG AAAGGCTCAA GGACGACCGG TGCGGATGTG ACCGCGGGTG GGAAGAGTTC
TACCGGAACC GCTGGCAGTA CGACAAGGTG GTGCGGAGCA CCCACGGGGT GAACTGCACC
GGCAGCTGTA GCTGGATGGT CCATGTGAAG GACGGCATCG TCGGCTGGGA GCTCCAGGCC
AACGACTATC CCCAGTTCGA CGGCACCATT CCCAACCACG AGCCCCGGGG GTGCACCCGG
GGGATCAGCT ACTCCTGGTA CCTCTACAGC CCGCTGCGGG TGAAGTACCC CTACATGCGC
GGCGCCCTCA TCGATCTCTG GCGTGACGCC CGGAGCCGCC ACGAAGACCC CGTGGAGGCC
TGGAAGAGCA TCGTGGAGAA CCCGGAATCC CGTCGGGCCT ACGTGAGCAA GCGGGGGACC
GGTGGCATGC GCCGGGCCGA CTGGGACGAG GTGACCGAGC TGATCGCCGC CTCCTCCATC
TACACCGCGA AGAAGTACGG CCCGGACCGG GTCATCGGCT TCTCGCCGAT CCCGGCCATG
TCCATGATCA GCTACGCGGC CGGTACCCGG TTCCTCCAGC TCTTCGGCGG GGTCGCCATG
AGCTTCTACG ACTGGTACTG CGACCTCCCG CCGGCGTCGC CCCAGGTCTG GGGTGAGCAG
ACCGACGTGA ACGAGTCCGC CGACTGGTAC AACGCCTCCT ACATTGTGCT CTGCGGCTCC
AACGTCCCCA TGACCCGGAC CCCGGACGCC CACTTCATGA CCGAGGCCCG CTACCGGGGG
ACCAAGGTGG TGGTCATGTC GCCGGACTAC AACATCGCCA CCAAGTTCGC CGACAACTGG
CTCCCGGTGG AGCAGGGGCA CGACGGCGCC TTCTGGATGG CGGTGAACCA CGTGATCCTC
AAGGAGTGCT ACGCCGACCG CCAGGTCCCC TTCTTCCAGG AGTATGCCCT CAAGTACACG
GACCTCCCGT TCCTCGTGAA GCTGGAGGAG AAGGACGGAG CGTTGAAGCA GGGGGAATTC
CTCCGGGCTG CCGAGTTCGA GCGGAGCGCC TCCCTCGAGC ATGCCGACTG GACCCTCTGC
GTGGCCGACG GCGCCGGGGA CGTGAAGATC CCCCACGGGA GCCTCGGCAC CCGCTGGAGC
AAGCAGGAGG GGAAGTGGAA CCTGGACATG ACGGATCTCG TGGACGGTAC CCCCATCGAC
TGCCGCCTGA CCCTCCTGGG TGGCGAGACC GGGAAGGTCC GCTTCCGGTT TGAAGCGGAA
GGGGAGAGCG TCCGCGAGGT GCCGGTCCGG CGGATTGAGA CGAAGAACGG CCCCGTGACG
GTGGCTACCG TGTACGACCT TCTCATGGCC CAGTTCGGCG TTTCCCGGGG CCTCGGGGGG
GACTATCCCA AGAGCTACGA CTCCGACAAG CCCTTCACCC CCAAGTGGCA GGAGAAGTAC
ACCGGCATCG CCGCCGAATC CCTCATCAAG ATCGCCCGGG AGTGGGCCGA GAACGGCGAG
AAGAGCGGCG GCCGGAACAT GATCATCATC GGCGCCGGGG TCAACCACTG GTACCACAAC
GACCTCATCT ACCGGGCCGC CATCACCGCC CTGATCCTGA CCGGCAGCGT CGGCCGCAAC
GGCGCGGGGC TCGCCCACTA CGTGGGGCAG GAGAAGGTGG TCCCCCTGGC TCCCTGGACA
TCCATCGCCA TGGCCCAGGA CTGGGTAAAG CCGTCCCGGC TCCAGAACAC CCCGAGCTTC
TGGTACATCC ACTCGGACCA GTGGCGCTAC GACCGGACAT TCGTCGACTA CCTCAAGCCC
GAGACCGGCG AGCGGATGCC CCTCCACGCC GCCGACATGA ACGCCAAGGC GGCCCGGCTC
GGCTGGCTCC CCTTCGCCCC CCACTTCAAC GAGAGCCCCC TGCGGCTCGT GGAGGCGGCC
AAGGCCGCCG GCGCCCAGAG CGACGACGAA ATCCGCTCCT GGCTCGTGAA TCGCCTGAAG
AGCGGAGAAA CCCGCTTCGC CATCGAGGAC CCGGATGGCC AGGGGAACTC CCCCAAGGTC
TGGTTCATCT GGCGGGCCAA CGCCATCTCC TCCAGCGCCA AGGGGCACGA GTTCTTCCTG
AAGCACGTCA TCGGCGCCCC CAACAGCAGC GTGAGCGCCA AGGAGGTGGC CAAGGGGCAG
GTGAAGGATC TCGTGTGGCA CGACAAGGCC CCCGAAGGGA AGATGGACCT GGTGGTGGAC
CTCAACTTCC GGATGGACAC CTCCACCCTC TACTCGGACA TCGTCCTCCC CACGGCCACC
TGGTACGAGA AGTCGGACCT GAACACCACC GACATGCACT CCTTCATCAA CTGCCTGGAC
GCCGCCGTGC CGCCGTCCTG GGAGTCGAAA TCTGACTGGA AGATCTTCAC CCGCATCGCC
AAGAAGGTGA GCGAGCTGGC GGTGAAGCAC CTCCCCACGC CGGTGAAGGA TATCATCGCC
GCGCCGCTCC TCCACGACAC CCCGGGCGAG ATCGCCCAGC GGCAGGTGAA GGACTGGAAG
CTCGGCGAGT GCGAGGCGAT CCCCGGCAAG ACCATGCCGA ACCTGGCCAT CGTGGAGCGG
GACTACGTGA ACCTCTACAA CCGCTACGTG TCGGTGGGGC CCCATATCGG CCACCTCCAT
GCCCACGGGG TCAGTTGGGA GGCGGACGAC GTCCACGAGC AGCTCCTGGA GACCATGCCG
ACCCGCACCT GGAACGGCAA GTCGTTCCTG GACATCGAAG ACGAAAAGAC CGTGGCCGAC
GTGCTCCTCT CCTTCGCGCC GGAGTCCAAC GGGGAGCTGG CCTACCGGGC CTACCAGAAC
CTGGAGAAGC GGGTCGGCAA GCCCCTGGCC GGGATCGCCG CCGGAAGCCG CGACCTGCGG
ATCAAGTGGG AGCACGTGAC CCAGAAGCCC CAGCGCTACT GCAGCACCCC GGTCTGGAGC
GGCCTCGTGA ACAACGGGCG TCCCTACGCC CCCTATACCC TGAACGTGGA ATACGACGTG
CCGTGGCGCA CCCTCTCGGG GCGCCAGTCC CTCTACCTGG ACCACCCCTA CTACGGCGAG
TTCCACGAGG GGCTCCCCAC CTTCAAGGCG AAGCTCAACC CGGCGATTCT GGACGAGACC
GAGGGGGAAC AGGGGCTTGT CCTCAACTTC CTCACCCCCC ACGGCAAGTG GAGCATCCAT
TCCACCTACA GCGACAACCT CCGAATGCTC ACCCTGGGCC GGGGGGGACC GGTGGTCTGG
CTCAACCACG AGGACGCAGC CGGGGCCGGC ATCGAGGACA ACGAGGAGAT CGAGGTCTAC
AACTTCAACG GCGTGGTGGT CTCCCGGGCC TGTGTCTCCT CCCGGATCCC GAAAGGGGCC
GCGGTGATGT ACCACGCGCC GGAGCGGACC ATCAACATCC AGAAGTCAAA GAAGACCGGC
AAGCGGGGCG GGGTCCACAA CAGCCTCTCC CGCATCCGCC TGAAGCCGAC CCTGATGCTC
GGGGGCTACG CCCAGTTCAG CTACTACTTC AACTACTGGG GACCGACCGG CGTGAACCGG
GACAGCTACG TGGTCGTCAG AAAGCTGAGG GGGTGA
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| Protein sequence | MTQERLKDDR CGCDRGWEEF YRNRWQYDKV VRSTHGVNCT GSCSWMVHVK DGIVGWELQA
NDYPQFDGTI PNHEPRGCTR GISYSWYLYS PLRVKYPYMR GALIDLWRDA RSRHEDPVEA
WKSIVENPES RRAYVSKRGT GGMRRADWDE VTELIAASSI YTAKKYGPDR VIGFSPIPAM
SMISYAAGTR FLQLFGGVAM SFYDWYCDLP PASPQVWGEQ TDVNESADWY NASYIVLCGS
NVPMTRTPDA HFMTEARYRG TKVVVMSPDY NIATKFADNW LPVEQGHDGA FWMAVNHVIL
KECYADRQVP FFQEYALKYT DLPFLVKLEE KDGALKQGEF LRAAEFERSA SLEHADWTLC
VADGAGDVKI PHGSLGTRWS KQEGKWNLDM TDLVDGTPID CRLTLLGGET GKVRFRFEAE
GESVREVPVR RIETKNGPVT VATVYDLLMA QFGVSRGLGG DYPKSYDSDK PFTPKWQEKY
TGIAAESLIK IAREWAENGE KSGGRNMIII GAGVNHWYHN DLIYRAAITA LILTGSVGRN
GAGLAHYVGQ EKVVPLAPWT SIAMAQDWVK PSRLQNTPSF WYIHSDQWRY DRTFVDYLKP
ETGERMPLHA ADMNAKAARL GWLPFAPHFN ESPLRLVEAA KAAGAQSDDE IRSWLVNRLK
SGETRFAIED PDGQGNSPKV WFIWRANAIS SSAKGHEFFL KHVIGAPNSS VSAKEVAKGQ
VKDLVWHDKA PEGKMDLVVD LNFRMDTSTL YSDIVLPTAT WYEKSDLNTT DMHSFINCLD
AAVPPSWESK SDWKIFTRIA KKVSELAVKH LPTPVKDIIA APLLHDTPGE IAQRQVKDWK
LGECEAIPGK TMPNLAIVER DYVNLYNRYV SVGPHIGHLH AHGVSWEADD VHEQLLETMP
TRTWNGKSFL DIEDEKTVAD VLLSFAPESN GELAYRAYQN LEKRVGKPLA GIAAGSRDLR
IKWEHVTQKP QRYCSTPVWS GLVNNGRPYA PYTLNVEYDV PWRTLSGRQS LYLDHPYYGE
FHEGLPTFKA KLNPAILDET EGEQGLVLNF LTPHGKWSIH STYSDNLRML TLGRGGPVVW
LNHEDAAGAG IEDNEEIEVY NFNGVVVSRA CVSSRIPKGA AVMYHAPERT INIQKSKKTG
KRGGVHNSLS RIRLKPTLML GGYAQFSYYF NYWGPTGVNR DSYVVVRKLR G
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