Gene Gmet_0327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_0327 
Symbol 
ID3740625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp363229 
End bp364482 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content61% 
IMG OID637777600 
Productpolysulphide reductase, NrfD 
Protein accessionYP_383295 
Protein GI78221548 
COG category[S] Function unknown 
COG ID[COG4881] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.180424 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.00000238958 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTACACG GTGAAGCATG GACGCTGAAA GAGTTGTTCG TCTACCCCAA CGAGTACATC 
TACTGGACCA TCCAGATCGT CATGTACCCG TTCATGACCG GCCTCGTGGC CGGCGCCTTT
GTCCTTTCCT CCCTCTATCA CGTCTTCGGG ATCAAGCAGC TGAAGGATAT CGCGCGGTTT
TCACTGGTCT TCTCCTTCGC CCTCCTCCCC GTGGCGATGA TCCCGCTCCA ACTCCATCTC
CAGCACCCGG AACGGGGGAT CGAGGTGATG CTGACACCCC ACTTCACCTC GGCCATTGCC
GCCTTCGGCA TCGCCTTCTC CACCTACGGC ATGATCGTCG CCTCGGAGCT TTGGTTCGTC
TACCGGCGGC ACTTCGTGGA GACGGCCCTG GCGCTTAGGG AAAAGCGGGA CAAAACCATC
CCCGAGCGGG GACGGCAGCT CCTCTTTTCG GCCCTCACCC TCGGTGCCTG GGACATCAGC
GAGCAGGCTC TGGCAAAGGA TGAACGGGCC GTGAAGATCA TGGCGACTGC CGGGATTCCG
GTGGCCTGCC TCCTCCACGG CTATGCCGGA TTTATTTTCG GCTCCGTGAA GGCCAATGCC
CTCTGGACGA CCCCCCTCAT GCCCTTCATC TTCATCTGCT CCGCCGTGGT GTCGGGGATC
GCCCTCTGCG TCCTCAGCTA CATCGTGACC ATGGAGGTCC GCAAGCTCAT GGTCGCCTGG
AGGAGGAAGA GCGACCCGAG CCTCCCCACT CCGGACGAGA TCAGGACCGT GGAGATGTAC
GAGGTCACCA TGACCGCAAA ATACCTGGTC CTGGCCCTCC TGGCGGCCCT GGGGCTGGAG
CTTCTGGACC TCCTCTTTCG GGACTACGCC AAGTTCAGCT CGTGGGAGAT CGTGCGGAGC
CTCATCTACG GCAAGGATTT CGTCAATGTC TTCGTGATCC AGTACGGGAT CGGCAACCTG
GTCCCCCTGG CCCTCTTCCT CCTGCCGCGG CTCACGGTGC GACGGGCGGT CGTGGCCACG
CTCCTGGTCC TCATGGGGGT CTTCATGATG CGGTGGAACC TGGTCATCGG CGGCCAGGCC
TTCTCGGCCT CCTTTTCCGG CTACATGCAC TACGAGCTTC CGATCATCCC CCACGACATC
GAGACCTTCA AGGAGGGGCT CCTGGGTGCC CTGCTGGTGG GGGTGCTGCC GTTCATCTTT
TTCTGGGGGC TGAACAAGAT TTTCCCGGTT TTCAAGTGCG AGGATACCCA CTGA
 
Protein sequence
MVHGEAWTLK ELFVYPNEYI YWTIQIVMYP FMTGLVAGAF VLSSLYHVFG IKQLKDIARF 
SLVFSFALLP VAMIPLQLHL QHPERGIEVM LTPHFTSAIA AFGIAFSTYG MIVASELWFV
YRRHFVETAL ALREKRDKTI PERGRQLLFS ALTLGAWDIS EQALAKDERA VKIMATAGIP
VACLLHGYAG FIFGSVKANA LWTTPLMPFI FICSAVVSGI ALCVLSYIVT MEVRKLMVAW
RRKSDPSLPT PDEIRTVEMY EVTMTAKYLV LALLAALGLE LLDLLFRDYA KFSSWEIVRS
LIYGKDFVNV FVIQYGIGNL VPLALFLLPR LTVRRAVVAT LLVLMGVFMM RWNLVIGGQA
FSASFSGYMH YELPIIPHDI ETFKEGLLGA LLVGVLPFIF FWGLNKIFPV FKCEDTH