Gene Gmet_0287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_0287 
Symbol 
ID3738678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp319623 
End bp320759 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content58% 
IMG OID637777562 
Product3-oxoacyl-(acyl carrier protein) synthase 
Protein accessionYP_383257 
Protein GI78221510 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones68 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTCCC AGTCCCGCAA CCAACCAGAC AAAACGGTTA CGGATCGTGT CGTCATAACC 
GGCATTGGAA CTGTAACCTC CCTTGGCTGC TCCCAATGGA GCACAGCCCT CGCATTGCGT
TTCAGGAAAA GCTCCTGGTG CGAGCACGAA ACGGTGCTCG TGGCCGACGA TCCGTACGGT
GCCGTACTTC GTGGGGCAAC TATCAGTCGC ATCCCGGAAG AAATCATCTC TCCTGAACTG
GACGGCGCCG AGCGAGCCGA GGCTCTATTT CATCCTGCAT TGAAAGAGTG CATGGCCGGG
CTTTCAATCG CCGAGCAAAA ACGACTTGTC TGCCGGATTG ATAATTTTAT CGATTATGAG
CAGCATCTTT TCCCTTCTCT CTTGCAGGAG GCATTCCCCG GCCTCTCCCT TGAGCATGGC
CAGAAGCCGA TCGAGCTTGG CCGCTGCTCG CTTTTTGAAC GGATCATCCA GGCCGGAGGT
GAGCTTTTGG CGGGAAATGC TGAGCGTATT CTGGTCGGAT GTGTCGATTC CCTCTGCGCT
ACTTCCTGGC TCATGTCAGT TTGTGATGAG GATGTGTTGA AAGACTCATT GACTCCCGAA
GGGATCATTG CCGGAGAAGC GGCGGGAGCT GTTCTACTTG AACGGGAAGC CGCCGCGCGG
CGGCGCAATG CGCCGGTTCT GGCCATTCTT TCGTCATGGG GACGGGGGAC GGAGCCCAAT
CTGTGGCACG GTCCCATTCC CTCTACCGGG CGGGGACTCA CCGACGCATT CCTTGAAGCG
ATTTCTCCTC ACGGGGATGG AGGAAAAGGT GTCGTAACGG TCATCGCCGA CCTTAACGGT
GACCGGCACC GTGCCCTTGA CTGGGCCTAC ACCGAGGGGC GGATTTTTAT CGATGGTGAT
CGGGAGCCGG AACTGCGGCA TCCCGCTTTC ATCGCCGGGG ATTGCGGCAA GGCCACGGGA
GCGCTTCTCC TTGCCGACGC CTTGGGGCGT TTCGCCTTCC ATCCAGGGTT TCGGGGGACC
CTTGCCCTCA GCACCTCCGA TGAATCGGGC GCCAGACGGG TCATCTGCCT GGAGCACGGT
GACCACGAAG AACGGAAGGG CTTTATTGAA CAGCTCCGTG CTCAACTTGC CGGTTAA
 
Protein sequence
MASQSRNQPD KTVTDRVVIT GIGTVTSLGC SQWSTALALR FRKSSWCEHE TVLVADDPYG 
AVLRGATISR IPEEIISPEL DGAERAEALF HPALKECMAG LSIAEQKRLV CRIDNFIDYE
QHLFPSLLQE AFPGLSLEHG QKPIELGRCS LFERIIQAGG ELLAGNAERI LVGCVDSLCA
TSWLMSVCDE DVLKDSLTPE GIIAGEAAGA VLLEREAAAR RRNAPVLAIL SSWGRGTEPN
LWHGPIPSTG RGLTDAFLEA ISPHGDGGKG VVTVIADLNG DRHRALDWAY TEGRIFIDGD
REPELRHPAF IAGDCGKATG ALLLADALGR FAFHPGFRGT LALSTSDESG ARRVICLEHG
DHEERKGFIE QLRAQLAG