Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_0285 |
Symbol | |
ID | 3738676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 316524 |
End bp | 317402 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637777560 |
Product | hypothetical protein |
Protein accession | YP_383255 |
Protein GI | 78221508 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3409] Putative peptidoglycan-binding domain-containing protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 75 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 0.888906 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTATAGAG AAAAATCCAA GTATTCCAAG CTTGAAGGCC CTCTTTCTAA TGTCAACTTA AATCTAACCA GCGCAAGAAA TCAAATTTTA TTTAGTATAC TCGGTAAACC AAGAATTGAT GGGATGTACG GAGAGAAAGA TGGGCCGCTA AACAACCCTC AATTAGAAAA ATTAATGGTG AGAGGCGTTG ACGTCGGGCC ATTCAAGGTC AATGGACTTG GTCTTGCGGT TGAAAGCCTA AAAACTGTAA TGGCTGATAT TAGTAAACAA CACAAAGACA TTTATGACAG ATTGAGCCAA GAAGGAATGC TTGTTGTACG CTACCAAAGG CCGACGGCAA AAAAACCAAT TGGTTGTCCG AATAGGCCTA TAAGCAACCA CTCATGGGGC ACAGCAATAG ACCTTAAGAT TGATGGTTTG CTTGATGGTC GAGGTGATAA TAAAAGTCAG CATGCGTTGA ATGTAATAGC TCCGATTTTC AATAAGTACA AATGGTACTG GGGTGGAACA TTTCCGACAG AAGACTCCAT GCACTTCGAA GTCAGCAAAG AAAAGCTCCT CGAATGGCAC AATGCCGGCT TGTTAGGACC GATTTCAAAA CGCCTGCCAG AGGCCAAAAT CCCCGAGACA ACAAGGCCAG CAAGCACAAG CTCTTCTTCA CGCCATCGTT CGATGTTTGA TTGGTTGCAG AAGGGCGACA GGGGGCCAAA AGTAGTTCAA CTGCAGAAAG CCTTAAAGTC CCGTGGCTAC AACCTCAAAT CCGACGGAGT TTTCGGGAAG AAAACAGAAA CAGCTCTTCA GGACTTTCAA CGCAAACAAG GGCTCCCCGA CAATGGTATT GTCGGCCCCA AAGCAGCTGC CTATCTGTTG TTTTTCTGA
|
Protein sequence | MYREKSKYSK LEGPLSNVNL NLTSARNQIL FSILGKPRID GMYGEKDGPL NNPQLEKLMV RGVDVGPFKV NGLGLAVESL KTVMADISKQ HKDIYDRLSQ EGMLVVRYQR PTAKKPIGCP NRPISNHSWG TAIDLKIDGL LDGRGDNKSQ HALNVIAPIF NKYKWYWGGT FPTEDSMHFE VSKEKLLEWH NAGLLGPISK RLPEAKIPET TRPASTSSSS RHRSMFDWLQ KGDRGPKVVQ LQKALKSRGY NLKSDGVFGK KTETALQDFQ RKQGLPDNGI VGPKAAAYLL FF
|
| |