| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0260 |
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| Symbol | |
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| ID | 3738632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 291318 |
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| End bp | 292388 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637777535 |
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| Product | pilus retraction protein PilT |
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| Protein accession | YP_383230 |
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| Protein GI | 78221483 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.0840945 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATGA ACCTTCTGAA CCAGATACTG GGTATCGCCT TCGAGAAGCG GGTGTCGGAT
CTCCATTTCG AGGTGGACAA TCCCCCCTTC TTCCGGGCCA AGGGGCAACT GCTCCGCTCC
AAGCTCCCCC GGCTGACCCC CCAGGACACG GAATTCATCG CCAAAACCGT CCTGGAGCAG
AACCGGCGCA CTTTCCCCGA CAATCTGCGG GAATTGGACG CCTCTTATTC CCTCCCCAAC
GGCGGCCGCT TCCGGGTCAG CATCTTCCGC CAGCGGGGGG CCATCGGCAT CGTCATGCGG
GTGATCCCTC CCCATGTGGG GAGCTTCGAG GAACTGAACC TGCCGCCGGT CCTAGGGGAG
ATCGCCAAGG CCCCCAACGG GCTCGTGCTG GTCACCGGTC CCACCGGCAA CGGCAAGTCC
ACGACCCTTG CCTCCATGCT CCGCCACCTG AACGAGACGT GCTCCTTCAA CATCATCACC
ATCGAGGATC CCATCGAATT CCTCTTCACC TCTGACCGGA GCTGCATCAT CCAGCGGGAG
GTGGGGATCG ACACGGAAAA CTTCAGCGCG GCGCTTCGCT CGGCGCTGCG GATGGACCCC
GACGTCATCA TGGTGGGGGA GATGCGGGAC CTGGAGACCA TCGACTCCTG CATCAAGGCG
GCGGAAACGG GGCACCTGGT CTTCTCCACC CTCCACACCC AGAGCGCCGT CTCCACCATC
AACCGGCTCA TCGGCCACTT CCCCCCCGAC GCCCAGGAGG TCCTGCGCCA GCGCCTGGCC
GACATCCTGG TGGCCACGGT GTCGTTGCGG CTCATCAAGG ACAAGAGCGG CGAGAACATC
CTCCCGGTGG TGGAGATCAT GCGGGCCACC ACCACCATCC AGGCATGCAT CCGCGAGGGG
CGCCTCGACG AGATCGAGAA GCACATCGAG AACGGCCGTT CCCTCTACCA CATGCAGACC
CTGGACCAGC ACCTCCTGGA GCTCTGCGAG AAGGAGATCA TCACCTTCGA TCAGGCCAAG
CAGATCACCC GCTCCATGGA CCTGGAACGG AAACTGGCCT TCACCGAATG A
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| Protein sequence | MDMNLLNQIL GIAFEKRVSD LHFEVDNPPF FRAKGQLLRS KLPRLTPQDT EFIAKTVLEQ
NRRTFPDNLR ELDASYSLPN GGRFRVSIFR QRGAIGIVMR VIPPHVGSFE ELNLPPVLGE
IAKAPNGLVL VTGPTGNGKS TTLASMLRHL NETCSFNIIT IEDPIEFLFT SDRSCIIQRE
VGIDTENFSA ALRSALRMDP DVIMVGEMRD LETIDSCIKA AETGHLVFST LHTQSAVSTI
NRLIGHFPPD AQEVLRQRLA DILVATVSLR LIKDKSGENI LPVVEIMRAT TTIQACIREG
RLDEIEKHIE NGRSLYHMQT LDQHLLELCE KEIITFDQAK QITRSMDLER KLAFTE
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