| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0219 |
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| Symbol | |
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| ID | 3739430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 250957 |
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| End bp | 252276 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637777495 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_383190 |
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| Protein GI | 78221443 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000000000279526 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 6.0222499999999995e-21 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACAATGA CTTCTTTTGG TCCGACCGGA CTCGACGCAA CGCTTATCCC GAAGATCGCC
GGGGAATGGG GAACCCCTAT TTACCTCCAC GATCAGCAGT ACATCGAGAA CAGCTGCGAC
CAGCTGCTTG CCATGCCCAA TGCCTACGGC CTGCACGTCC GCTACGCCAT CAAGGCCAAC
TCTGACCGCA CCGTCCTGCG CATTGTCACC GGCAAGGGGC TGGACCTGGA CTGCTCATCC
CTGGACGAGG CCGCCCGGGC CCATGCCGCC GGCATCCCCT ACAGCCGCAT GATGCTCACC
ACCCAGGAGG TCCCCACCGG CGAGGAGCGG ACCGAACTGG AAGCCATGAT CAAGGTCGGC
CTCAAGTACA ATGTCTGCTC CACGCTGCAG TACCAGCTCA TCGCCGACTT TGCCGCCCAG
AACAAGATCG ACCTTTCCAT GAGGGTCCAT CCGGGCGCCG CCGGCGGCGG CGAGAGCGCC
ACCCGCGACA CCGGCAGCGA GTACTCCTGC TTCGGCGTCC ACCTGCGCGA CGTCCCGACC
GTGAAGGCCC TGGCCGACGA GAAAGGGCTC CGCTTCACCC AGGTCCACGT CCATATCGGC
TCCGGCGGCG CCCCGGAGAA GTGGCAAGAG AACATCGACC GGGAGCTCGG CTTCATCAAA
ACCTACTTCC CGGATGCAGT CACCGTCAGC TTCGGCGGCG GCCTCAAGGT GGCCCGCATG
CCGGGCGAGA AGCAGGCCGA CATCGCCACC CTGGGAGCCT ATGCAAAGCA GCGGATCGAA
GAGTTCAAGG CCGCCACCGG CCGCGAACTG ATGATGGAGA TCGAGCCGGG GACCTTTGTG
GTGGCCAACT CGGGGCACAT CGTCACTCGC ATCATCGACA AGAAGTTCAC CAACGAGATG
AACTTCCTCA TCGTCGACGG CGGCATGGAG CTACTGACCC GGCCGCTCCT CTACGGCTCC
GAGCATCCCA TCGCCATCGT CCGCCAGGAC GGGACGCTCC TCTCCAGCGA GTACGACCAG
ACCCCCACGG CGGGGCTGAA GCCCTTCGGC ATCGTCGGCC GCTGCTGCGA AAGCGGCGAC
TCGGTCCGCC TGGACAAGGA GGGGAACATC GTGCCGGTCA TGATCGTTGA GCCGGAGATC
GGCGACTACG TCGTCATCGG CGGCACCGGC GCCTACTCCG AGAGCATGTC GCCGGAGAAC
TACAACTCCC ACCGCAAGCC GGGAGCCGTC ATGAGGACCA AAACCGGCGA ACTGGTGCTC
ATCCGGAAGA AGCAGGTACG GGAGCAACTG ACCCAGAACG AACTGGACGT GACGCTGTAA
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| Protein sequence | MTMTSFGPTG LDATLIPKIA GEWGTPIYLH DQQYIENSCD QLLAMPNAYG LHVRYAIKAN
SDRTVLRIVT GKGLDLDCSS LDEAARAHAA GIPYSRMMLT TQEVPTGEER TELEAMIKVG
LKYNVCSTLQ YQLIADFAAQ NKIDLSMRVH PGAAGGGESA TRDTGSEYSC FGVHLRDVPT
VKALADEKGL RFTQVHVHIG SGGAPEKWQE NIDRELGFIK TYFPDAVTVS FGGGLKVARM
PGEKQADIAT LGAYAKQRIE EFKAATGREL MMEIEPGTFV VANSGHIVTR IIDKKFTNEM
NFLIVDGGME LLTRPLLYGS EHPIAIVRQD GTLLSSEYDQ TPTAGLKPFG IVGRCCESGD
SVRLDKEGNI VPVMIVEPEI GDYVVIGGTG AYSESMSPEN YNSHRKPGAV MRTKTGELVL
IRKKQVREQL TQNELDVTL
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