| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0201 |
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| Symbol | alaS |
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| ID | 3739663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 232404 |
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| End bp | 235034 |
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| Gene Length | 2631 bp |
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| Protein Length | 876 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637777477 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_383172 |
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| Protein GI | 78221425 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.0035752 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCGGAA ACGAACTACG CGCCAGATTC CTGAAATTTT TCGAGGACCG CGGACACACC
GTGGTCCCCA GCTCCCTCCT CATCCCCCAC AATGACCCGA CGCTCCTTTT TGCCAATGCC
GGCATGAACC AGTTCAAGGA CTGCTTCCTC GGCATGGAGG ACCGGGGGTA CACCCGGGCA
ACCAGTTCCC AGAAGTGCGT GCGGGCCGGG GGGAAGCACA ACGACCTGGA GAACGTGGGG
CGCACCGCCC GGCACCATAC CTTCTTCGAG ATGCTCGGCA ATTTCTCCTT CGGCGACTAC
TTCAAGAAGG AGGCCATTGC CTTTGCCTGG GAGTTCCTCA CCAAGGACCT GGGGCTTGAC
AAGGACCGCC TCTACGTGAC GGTCTACACC GATGACGACG AGGCCGCCGA CATCTGGCAC
CACCAGGAGG GGGTTCCCCG CGAGCGGATT TTCCGCTTCG GCGAGAAGGA CAACTTCTGG
TCCATGGGAG ACACCGGCCC CTGCGGCCCC TGCTCCGAGA TCTTCTGGGA CAATGGTCCC
GAGGTAGGGT GCGGCTCCCC CGACTGTACC GTCGGGTGTG ACTGCGACCG CTACATGGAG
ATCTGGAACA ACGTCTTCAT GCAGTTCAAC CGCTCCGCCG ACGGCACCAT GACCCCGCTC
CCCAAACCCT CCGTCGATAC CGGCATGGGT CTTGAGCGGA TCTGCACCGT CATGCAGGGG
GTTAAATCCA ACTACGACAC TGACCTCCTC CAGGGGGTCA TCAGGCATGT GGAGCGGCTT
TCGGGAAAAC GGTACCGGGA GAATGAGAAG GACGACGTCT CCATGCGGGT CATCGCCGAT
CACGCCCGGG CCACCACCTT CCTCATCTGC GACGGTGTCC TTCCCTCCAA CGAGGGGCGG
GGCTACGTGC TGCGCCGGAT CATGCGCCGG GCAGCCCGCC ACGCCAAGAT GCTCGGCTTT
GCCGAGCCGG TCCTCTACCG GACCGTGGAT GCCGTGAACG AGATGATGGG GGGCTCATAC
CCGGAGCTTC TGGAGCGGGA AGAATACATC AAAAAGGTGA TCCGGGCCGA GGAGGAGCGC
TTCGCCGAAA CCCTCGACCG GGGCCTCGCC ATCCTGAACG ACGCCGTGGC CCAGTTGAAG
GGGGAGGGGA AGACGGTGAT CCCCGGCGAA ACCCTCTTCC GCCTTTACGA CACATTCGGT
TTTCCCACTG ACCTCACGGC CGACATCGTC CGCGCCGAAG GGTTCACCAT CGACGAGCCG
GGCTTCGAGG CCTGCATGGG ACGCCAGCGG GAGCAGGCCC GGGAGCACTG GAAAGGTTCC
GGCGAAGAAG GGATTGCCGC CGTCCACAAG GAACTCCACA ACCGTGGGGT CAGAAGCGTC
TTTGTGGGTT ATGACGAGAA GTGCAGCTAC GCAGCGATCG GCAGCATCCT CCGTGGTGGC
TCCGAGGTGG CCGAGGCGAA GGCCGGCGAA GATGTGGAAA TCATCACCGA CAGGACCCCC
TTCTACGGCG AGTCCGGCGG CCAGGCCGGA GATACCGGCA CCATCTCCAC CGGCTCGGCC
CACGTGCGGG TGACCGGCAC GATCCGCCCC TATCCCGACC TCATCGTCCA CCGGGGAACC
GTCGTCGAGG GGACCATCAA GACCGGCGAG GCGTGCGACC TGAAGGTTGC GTCCGTGGAT
CGCGACGCCA CGGCCAGAAA CCACACCGCC ACTCACCTCC TCCAGACGGC GCTCCGCCGG
GTGCTCGGCG AACACGTGAA GCAGGCCGGC TCCCTCGTGG CGCCGGACCG GCTCCGTTTC
GACTTCACCC ACTTTGCCGC CATGACCCCG GAGGAAATCC GCCGGGTGGA GGAGATCGTC
AATACCTTCA TAATGGAGAA CGATACGGTC CATGCCCGGG AGATGGCTGT TGAGGAAGCC
ATGGAGAGCG GAGCCACGGC CCTGTTCGGC GAGAAGTACG GCGATCGGGT ACGGGTGGTC
AAGGTGGGGG AGGTGAGCGC CGAGCTCTGC GGCGGCACCC ACGTCCGGGC CGCCGGCGAC
ATCGGCTCCT TCAAGATTCT CTCCGAGGCG GGAATTGCCG CCGGGGTGCG CCGCATAGAG
GCCCTGACCG GCATGGGGGC GCTGCGCCAC ATCCAGGAGC TGGAGGATGA GAAGCGGCAG
ATCGCGGCCC TCATGAAGGC CGAGGGGGGA GACAATATCG ACCGGCTCCA GAAACTTCTC
GCCCGCCAGC GGGAGATGCA GCGGGAGATC GAGACGCTCC AGGGTCAGCT CAATGCGGCC
AAATCCGGGG ATCTCTTGGC GGATGTCCGG GAGGTGAACG GTGTGAAGGT CCTGGCCACG
AAAGTGGAGG TGGACGATCC GAAAAAGTTG AGGGAGTTGG CCGATACCCT CAAGGACCGT
CTCGGTTCCG GGGTTGTGGC CCTTGGGTGC GAGAAGGACG GCAGGGCCAA CCTCCTCGTG
GCGGTGACGA AAGATCTGGC GGGCCGCATC AGGGCCGGCG ACATCATCCG GCAGCTGGCG
CCGGTCATCG GCGGGAGCGG CGGCGGCAAG CCGGAGCTGG CCCAGGCGGG GGGGAGCCAG
CCCGACATGC TGGCCGAGGC CCTCGGTAAG GTGTACGGGC TCATCGGCTG A
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| Protein sequence | MTGNELRARF LKFFEDRGHT VVPSSLLIPH NDPTLLFANA GMNQFKDCFL GMEDRGYTRA
TSSQKCVRAG GKHNDLENVG RTARHHTFFE MLGNFSFGDY FKKEAIAFAW EFLTKDLGLD
KDRLYVTVYT DDDEAADIWH HQEGVPRERI FRFGEKDNFW SMGDTGPCGP CSEIFWDNGP
EVGCGSPDCT VGCDCDRYME IWNNVFMQFN RSADGTMTPL PKPSVDTGMG LERICTVMQG
VKSNYDTDLL QGVIRHVERL SGKRYRENEK DDVSMRVIAD HARATTFLIC DGVLPSNEGR
GYVLRRIMRR AARHAKMLGF AEPVLYRTVD AVNEMMGGSY PELLEREEYI KKVIRAEEER
FAETLDRGLA ILNDAVAQLK GEGKTVIPGE TLFRLYDTFG FPTDLTADIV RAEGFTIDEP
GFEACMGRQR EQAREHWKGS GEEGIAAVHK ELHNRGVRSV FVGYDEKCSY AAIGSILRGG
SEVAEAKAGE DVEIITDRTP FYGESGGQAG DTGTISTGSA HVRVTGTIRP YPDLIVHRGT
VVEGTIKTGE ACDLKVASVD RDATARNHTA THLLQTALRR VLGEHVKQAG SLVAPDRLRF
DFTHFAAMTP EEIRRVEEIV NTFIMENDTV HAREMAVEEA MESGATALFG EKYGDRVRVV
KVGEVSAELC GGTHVRAAGD IGSFKILSEA GIAAGVRRIE ALTGMGALRH IQELEDEKRQ
IAALMKAEGG DNIDRLQKLL ARQREMQREI ETLQGQLNAA KSGDLLADVR EVNGVKVLAT
KVEVDDPKKL RELADTLKDR LGSGVVALGC EKDGRANLLV AVTKDLAGRI RAGDIIRQLA
PVIGGSGGGK PELAQAGGSQ PDMLAEALGK VYGLIG
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