| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0199 |
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| Symbol | |
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| ID | 3739661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 230732 |
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| End bp | 231895 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637777475 |
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| Product | pilus retraction protein PilT |
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| Protein accession | YP_383170 |
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| Protein GI | 78221423 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 51 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.035098 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTCA ATGATATTCT TGCCATAGCG GTCAAGGCTA AAGCGTCTGA TATCCACATC
AAGACGGGGC TCCCCCCGGT TGTCCGGATC GATGGACGGC TGCGGCCCAT TCCCAATGCA
CAGCGTCTTG CCCCGGACCA GGTTCGCGCC ATGGCCTTTG CCATCATGAA TGAGCGACAA
AAGGGGATCT TCGAGGAGCA CTACGAGTGC GACGTGGCCT ACGGGGTGCC GGGACTCGGC
CGCTTCCGGG TGAGTATCTA TTCCCAGCGG GGGACCGTGG CCATGGTCTT CCGGTCCATC
CCCTTCGGCA TCCCCTCCAT TGAGAACCTG ACCCTTCCGC CGGTCATCAA GAAGCTTGCA
CTGGAGGAAC GTGGGCTCAT CCTCGTCACC GGCACCACGG GAAGCGGCAA GTCCACGACC
CTGGCCGCCA TGATCGACTA CATCAACGAG CACCGGACCT GCAACATCAT CACCGTCGAA
GACCCGGTGG AGTTCCTGCA TCGGGACAAG AAGAGCATCC TCTCCCAGCG GGAGGTGGGG
TTCGATACCC TTTCCTTCTC CACTGCCCTG AAGGGAGCCC TACGCCAGGA CCCGGACGTG
GTTCTCGTGG GGGAGATGCG GGACCTGGAA ACCATCGAGA CCGCCATGCA CGCCGCCGAG
ACCGGGCACC TGGTCATGTC CACCCTCCAT ACCCTGGACG CCGCCGAAAC CATCAACCGG
ATCATCTCCG TCTTCCCTCC CTTCCACCAG CGCCAGGTCA GGCTCCAACT CTCCGGGGTC
ATCAAGGGGG TCATATCCCA GCGGCTGGTC CCCCGGGCCG ACGGCAAGGG GCGGGTTCCG
GCCGTGGAGG TCATGATCGG CACCGCCCGC ATCAAGGAAT ATATCGACGA CAAGGACAAG
ACGAAGCTCC TCCCCGAGGC CATCGCCCAA GGGTTCACCA CCTACGGGAT GCAGACATTT
GACCAGTCCC TCATGCAGCT CTACACCGGC AAGCTCATCA CCTACGAGGA AGCGCTCCGG
CAGTCCACCA ACCCGGATGA TTTCGCCCTC AAGGTGTCGG GCATCTCTTC CACGTCCGAC
AGCACGTGGG ACAACTTTGT CCACGACGAA GCCCCCCCCG CGGCTGCTGG AGATACGCCC
ACCGAGGGGA TCGAGAAGTT TTAG
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| Protein sequence | MELNDILAIA VKAKASDIHI KTGLPPVVRI DGRLRPIPNA QRLAPDQVRA MAFAIMNERQ
KGIFEEHYEC DVAYGVPGLG RFRVSIYSQR GTVAMVFRSI PFGIPSIENL TLPPVIKKLA
LEERGLILVT GTTGSGKSTT LAAMIDYINE HRTCNIITVE DPVEFLHRDK KSILSQREVG
FDTLSFSTAL KGALRQDPDV VLVGEMRDLE TIETAMHAAE TGHLVMSTLH TLDAAETINR
IISVFPPFHQ RQVRLQLSGV IKGVISQRLV PRADGKGRVP AVEVMIGTAR IKEYIDDKDK
TKLLPEAIAQ GFTTYGMQTF DQSLMQLYTG KLITYEEALR QSTNPDDFAL KVSGISSTSD
STWDNFVHDE APPAAAGDTP TEGIEKF
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