| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0195 |
|---|
| Symbol | |
|---|
| ID | 3739657 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 225734 |
|---|
| End bp | 226183 |
|---|
| Gene Length | 450 bp |
|---|
| Protein Length | 149 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637777471 |
|---|
| Product | phosphatidylglycerophosphatase |
|---|
| Protein accession | YP_383166 |
|---|
| Protein GI | 78221419 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1267] Phosphatidylglycerophosphatase A and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 0.154133 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 0.600335 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGGGCT TCGTCGTCTG CGCGGCAAGC TGGTTCGGTA CCGGGTTTTT CCCCGTGGCT
TCGGGGACCG TGGGGACCCT GGGGGCCATC CCCCTCTACC TGGTCCTGGC GCGGCTTCCC
CTCTGGCTCT ACCTCCTGAC TCTCGTCCCC TTCTTCTTCC TCGCTTCATG GGTCTCAGGG
GCGGCGGAAC GGGAGTTCGG CGAGAAGGAC TCGGGAAAGA TCGTCATTGA CGAGGTGATC
GGCTTCCTCA TAACCATGGC CGGGGCGCCG GTCCACTGGC GGAGCATCGT GATCGGCTTT
CTCCTCTTCC GGTTCTTCGA CATCGTCAAG GTGCCGCCGG CCCGCTACTT CGACCGGCAG
GTGAAAAACG GTTACGGCGT GGTCCTCGAT GACGTGGTGG CCGGCATCTA CGCCTGCGTG
GTGCTCCACG TGATCCTGAG GTTTCTGTGA
|
|---|
| Protein sequence | MRGFVVCAAS WFGTGFFPVA SGTVGTLGAI PLYLVLARLP LWLYLLTLVP FFFLASWVSG
AAEREFGEKD SGKIVIDEVI GFLITMAGAP VHWRSIVIGF LLFRFFDIVK VPPARYFDRQ
VKNGYGVVLD DVVAGIYACV VLHVILRFL
|
|---|
| |