| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0123 |
|---|
| Symbol | |
|---|
| ID | 3738030 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 149369 |
|---|
| End bp | 150493 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637777402 |
|---|
| Product | flavin oxidoreductase/NADH oxidase |
|---|
| Protein accession | YP_383097 |
|---|
| Protein GI | 78221350 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.00317178 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 83 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAAGG TGTTCGACGA GACAAAGATC CACCACCTGA CACTCCGCAA CCGGCTGGTC
CGCTCCGCCA CCTGGGAGGG GATGTGCCGG GCCGGAGGGC ATCCCACGGA GAAGCTGGCC
GCCTACTACG GGACCCTGGC CCGGGGCGGG GTGGGGCTCA TCATCTCCGG CTACGCCTTC
GTCCGTCCCG ACGGAAAGCA GCTTCCCGGA CAGCTGGGAA TCCACGAGGA CTCCTTTGCC
CCCGAGGCAC GGCTCCTGAC CGAGGCGGTC CACCGGGAGG GGGGTAAAAT CTGTCTCCAG
CTGGTCCACT GCGGCGGCCA GACCACGGCC AGGGCGGCCG GCGCTCAGCC AGTGGCCCCT
ACCGCCGTGC AAATCGATCA ATACCCGGAA CTTCCCCGTG AACTCCCCGA GGCCGAGATC
GCGGATCTGG TGGCAGCCTT CGCCGCCGGC GCCGTCCGGG CCCGGGAGTG GGGCTTCGAC
GCGGTCCAGC TCCATGCCGC CCACGGCTAC CTCATCAACC AGTTCCTCTC CCCCCTCACC
AACCGCCGCA CCGACCGCTA CGGCGGCTCC CTGGAGAACC GGTGCCGCTT TCTCCTGGAG
ATTTCCCATG CTGTACGTGC CGCCGTGGGG AAGGATTTCC CGGTCATGGT GAAACTCAAC
GGCTCCGACA ACCTGAACGG GGGACTCGAC CTGGAGGAGG CGGTTCTGGT GGCCCGGATG
CTGGATGAGG AGGGGATCGA CGCCATCGAG GTCTCCGGCG GCACACCGGC CTCGGGCGGA
CAGACCCCGG TCCGCCAGGG GATCGAGACC CGGGAGCAGG AGGCCTACAA CCTCCCCCTC
GCCTACCGGA TCAAGCAGGT GGTCTCCTGC CCCGTCATGG TGGTGGGGGG GTTCCGCACC
TTCGAGCTGG TGGAAGGGGT CATCCGACGG GAAGAGGCCG ACTTTGTCTC CCTTTCCCGC
CCCCTCATCC GGGAGCCCAA CCTCCCTCGC CGCTGGGAGG AGGGGGACGA GAGCCGGGCC
CGCTGCATCT CCTGCAACGG CTGCTTCAAG CCGGGGATGA AGGAAGGGGG AATCTACTGC
GTGGTGGACA AGGTGGAGCG GGAGAGCCGG GCGTTTTCCC TCTGA
|
|---|
| Protein sequence | MRKVFDETKI HHLTLRNRLV RSATWEGMCR AGGHPTEKLA AYYGTLARGG VGLIISGYAF
VRPDGKQLPG QLGIHEDSFA PEARLLTEAV HREGGKICLQ LVHCGGQTTA RAAGAQPVAP
TAVQIDQYPE LPRELPEAEI ADLVAAFAAG AVRAREWGFD AVQLHAAHGY LINQFLSPLT
NRRTDRYGGS LENRCRFLLE ISHAVRAAVG KDFPVMVKLN GSDNLNGGLD LEEAVLVARM
LDEEGIDAIE VSGGTPASGG QTPVRQGIET REQEAYNLPL AYRIKQVVSC PVMVVGGFRT
FELVEGVIRR EEADFVSLSR PLIREPNLPR RWEEGDESRA RCISCNGCFK PGMKEGGIYC
VVDKVERESR AFSL
|
|---|
| |