| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0106 |
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| Symbol | |
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| ID | 3738885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 132351 |
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| End bp | 133295 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637777385 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
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| Protein accession | YP_383080 |
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| Protein GI | 78221333 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.00290718 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCA GCAATCTCCT TATCCATCTG CACAACAACA TTGACGCCTT CACCCTGAAG
CCACGTCACG TCGAGCAGAT ACGCCAAGCA CTCCCGGAAG TGGCCATTAC CGTCTCGGCG
AGCGACAGCG ACTTCATGGA CCGGCTTCCC GATGCCGAAT ATGCCCTTGT GTGGGTCTTC
AAACCCGAGT GGTATGCGAC CGCTCCCCGG CTTAAGGCAC TCTTCACTCC TGCCGCCGGC
CGTGACTGGG TTGCGGCAGA CCCGTCAGGG AGGGTGATGA CCTGTCATGG CAGCTTCCAC
GGTCGTATCA TGCGCGAGAG TCTTCTCTCC ATGATGCTTT ATTTCAACCG GCGCCTCGGC
CAGTCGCTTG AAGATCAGGG CCGCCGGATG TGGGGGCGTC CGGACTACAG CGGTTGTGTC
GGCCTCTTCA GCCAGCGGGT CATGATCGTA GGTTTGGGGG CGCTGGGGCA GTCCATGGCG
GAACTGCTCA AAGCCTTCGG TGCGCACGTA ACCGGGGTCA AGCGCAACCC GGAATCCTTT
GCGGGCAGCC CTTGTGTCGA CAGGGTGATC TCTTTTGACG CGCTGGAGGA GGCGTTGCCT
GAAGCCGATC ATGTGGTTCT GCTGCTTCCC GGCGGGACGG CAACCGATGG TATTTTCACC
GCACGACACT TCAATGCCAT GAGGCCGGGA GCCTACCTTT ACAACCTGGG TCGAGGGAAC
TGTTACCGGG AGGAAGACCT TGTGGCCGCC CTGGAGGATG GCCGCCTGGC AGGTGCCGGT
CTGGATGTCT TTGCCGAAGA GCCGCTGCCG GCCTCCTCGC CTCTCTGGGA GCAACGCAAC
GTCCTGATCA CGCCCCATTC CAGCGCCATC AGCCGGGAGT ACCTCGACCT CTTTATTCAG
GAGTGGCTAG AGACCCTGCG GAAGGGTGCG CCGCAGAACG CGTAA
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| Protein sequence | MKISNLLIHL HNNIDAFTLK PRHVEQIRQA LPEVAITVSA SDSDFMDRLP DAEYALVWVF
KPEWYATAPR LKALFTPAAG RDWVAADPSG RVMTCHGSFH GRIMRESLLS MMLYFNRRLG
QSLEDQGRRM WGRPDYSGCV GLFSQRVMIV GLGALGQSMA ELLKAFGAHV TGVKRNPESF
AGSPCVDRVI SFDALEEALP EADHVVLLLP GGTATDGIFT ARHFNAMRPG AYLYNLGRGN
CYREEDLVAA LEDGRLAGAG LDVFAEEPLP ASSPLWEQRN VLITPHSSAI SREYLDLFIQ
EWLETLRKGA PQNA
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