| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0089 |
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| Symbol | |
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| ID | 3739415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 112218 |
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| End bp | 114446 |
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| Gene Length | 2229 bp |
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| Protein Length | 742 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637777367 |
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| Product | ATP-dependent DNA helicase PcrA |
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| Protein accession | YP_383063 |
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| Protein GI | 78221316 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01073] ATP-dependent DNA helicase PcrA |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0413312 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.000000100763 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGACCTTC TGAAAAATCT CAACCCGCCC CAGAAGGAGG CGGTTCTCCA CGGCGAGGGG
CCGCTCCTGG TTCTGGCCGG AGCCGGATCC GGCAAGACCC GGGTCATCGT CCACCGTATC
GCTCACCTGA TCTGCAACCT CGGCGTCCCC CCGTGGCAGA TTCTGGCGGT TACCTTCACC
AACAAGGCCG CCGGCGAGAT GCGGGAGCGG GTGGAGCGGC TCGTGGGAGC CGGCGAGGCT
CCCCTCATCG CCACCTTCCA CTCCACCTGC GCCCGGTTCC TGCGCCGCGA TATCCACCAC
CTGGGGTATG ACTCCTCCTT CGCTATCTAC GACGACAAGG ACGCGGAAAA GCTTCTGAAG
GAGGTGATCG CCGGCCTCGG CCTGGACGAG AAACGCTTCC CGGCCCGCTC CTTTGCCGCC
GCCATCGACG ACTGCAAGAA CCGGGGCATC CCCCCCGGGG AGATCCCCAC CGGCGACTAC
ACCGGCGAGA TGCTGGCCCG GGTCTACGGC GCCTACCAGG AGCGGCTGAA GAAGTGCAAC
GCCCTGGACT TCGGCGATCT CCTCATGCTG ACGGTCCGTC TCTTAGAAGA GCACCCCGAG
GTGCTGGCCC GCTACCGGGA CAAATATCGC TGGATCCTTG TGGACGAGTA TCAGGATACG
AACCCGATTC AGTACCGGCT CGTGCGGCTT CTGGCCGGGG AGCGGCGCAA CCTCTGCGTG
GTGGGGGACG ATGACCAGTC AATCTATCGG TGGCGGGGGG CCGACATCCG GAACATCCTC
GACTTCGAGA AGGATTTTCC CGGCGTGGTC ACAGTTAAGC TGGAGCAGAA CTACCGTTCC
ACCCAAAACA TCCTGGCCGC GGCCGGGGCC GTGGTGGCCA AAAACCGCGG CCGCAAGGCC
AAGACCCTCT GGAGCGAGAA CCCGGCCGGC GAGGCCATTG TCTACCGGCG CCTCTCCGAC
GAGCGGGAGG AGGCCCGCTT CGTCTGCCGG GAGGTGGAGA AGCATGTGCG GCGCGGCGGG
GATCTGCGGG ACGTGGCGGT CTTCTACCGG ACCAACGCCC AGTCCCGGGT CATCGAGGAC
GCCATGGTGG CCGACGGGAT TCCCTACCAC ATGGTGGGGG GGATGCGGTT CTACGAGCGG
ATGGAGGTAA AGGACATCCT CGCCTACCTG AAGGTCCTCG TGAACCCCGC CGACGAGGTG
TCCCTCAAGC GGATCATCAA CGTCCCGGCC CGGGGTATCG GCCACGCCAC CGTGGACAAG
GTGGCGGAGC TGGCATTCCG CAAGGGGATC ATTCTCTACG ACGCCTTCAG CGAGGCGTCC
ACCAGCGGAC TCCTCTCCAC CGGCCCCCGG GGGAAAATCG CCGGCTTCAT GGCACTCATG
GAGCAGTTTG CCGGCCTCGC CGGCACGGTA CCCCTGTCGG AGCTCGCCTC CCGCATCATC
GACGGGACCG GCTACGCCGC CAAACTGAAG GAAGAGCGGA GCGACGAGGC CCAGGACCGC
CTCGACAACC TCCAGGAACT CTGTTCCGCC ATGGAGGAGT TCGAGCGAAC GAGCGACGAG
AAGACCCTGG CCGCCTTCCT GGAGCAGGTG GCCCTCGTGT CGGATCTGGA GCGGGGCGAG
GGGAAGCGGG AATCGGCCAC CCTCATGACC CTCCACGCGG CCAAGGGGCT CGAATTCCCA
GTGGTATTCA TGATCGGAAT GGAGGAGAAG CTTTTCCCAC ACGTCCGCTC CCTGGACGAC
CCCGAGGCCA TGGAGGAGGA GCGGCGCCTC TGCTACGTGG GGATGACCCG GGCGAGGGAG
CGGCTGATCC TCACCAACGC CCGCCGCCGG CGACTCTTCG GCCAGGACCA GGTGAACATG
TCGTCCCGCT TCATCGCCGA CGTTCCCCGG GATCTCCTGG ATCTGGAAGA CGAGTACCAG
TCCTCCTTCG GCTTCGGCGC AGGACGGGGG CTGGAGCGGG AGACAACAGC CGCCGAACCG
ACGCGCCACA ACCTGGCGAG CATCTTCGAA ACGGAGATCG AGCCCGATTT CGACGACATC
GAGGTGATCC CCGACGAGCC CGAGGACGGC GGCATCTGGC TCGGCATGAA GGTGCGCCAC
GGCAAGTTCG GCGTCGGCGT CATCCGCAAG ATCGAGGGGA AGGGGGACGA CCAGAAGGTG
ATCGTCTGGT TCAACTCCGT GGGGCCGAAG AAGCTGTTGG TGCGGTTTGC AGGGTTGGAG
CGGGTTTGA
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| Protein sequence | MDLLKNLNPP QKEAVLHGEG PLLVLAGAGS GKTRVIVHRI AHLICNLGVP PWQILAVTFT
NKAAGEMRER VERLVGAGEA PLIATFHSTC ARFLRRDIHH LGYDSSFAIY DDKDAEKLLK
EVIAGLGLDE KRFPARSFAA AIDDCKNRGI PPGEIPTGDY TGEMLARVYG AYQERLKKCN
ALDFGDLLML TVRLLEEHPE VLARYRDKYR WILVDEYQDT NPIQYRLVRL LAGERRNLCV
VGDDDQSIYR WRGADIRNIL DFEKDFPGVV TVKLEQNYRS TQNILAAAGA VVAKNRGRKA
KTLWSENPAG EAIVYRRLSD EREEARFVCR EVEKHVRRGG DLRDVAVFYR TNAQSRVIED
AMVADGIPYH MVGGMRFYER MEVKDILAYL KVLVNPADEV SLKRIINVPA RGIGHATVDK
VAELAFRKGI ILYDAFSEAS TSGLLSTGPR GKIAGFMALM EQFAGLAGTV PLSELASRII
DGTGYAAKLK EERSDEAQDR LDNLQELCSA MEEFERTSDE KTLAAFLEQV ALVSDLERGE
GKRESATLMT LHAAKGLEFP VVFMIGMEEK LFPHVRSLDD PEAMEEERRL CYVGMTRARE
RLILTNARRR RLFGQDQVNM SSRFIADVPR DLLDLEDEYQ SSFGFGAGRG LERETTAAEP
TRHNLASIFE TEIEPDFDDI EVIPDEPEDG GIWLGMKVRH GKFGVGVIRK IEGKGDDQKV
IVWFNSVGPK KLLVRFAGLE RV
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