| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0083 |
|---|
| Symbol | |
|---|
| ID | 3739409 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 101105 |
|---|
| End bp | 103597 |
|---|
| Gene Length | 2493 bp |
|---|
| Protein Length | 830 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637777361 |
|---|
| Product | Band 7 protein |
|---|
| Protein accession | YP_383057 |
|---|
| Protein GI | 78221310 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2268] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.148744 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.00195276 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTTATTAA ATGTCGTTCT TGACCACTGG GGGTACTTTG CCGCACTGGT GCCCATTGCC
GTCCTCCTCT ATGCCTCAAT CGTCATTGTC GGCGGTAACG AAATCGCCCT CATCGAGCGG
CGCTGGTTCG GGAGCAAGAT GCCCCAGGGA CGTGTCGTGG CCCTGGGGAA CGAGGTGGGC
ATCCAGGCCC GCACCCTCGG CCCGGGGCTC CATTTCCTCA TCCCCTTCAT CTACAAGGCG
ACCAAGAGCG TTTTCACGGA AATCCTCGAC AACGAGATCG GCCTCATCGA ATCGGTGGAC
GGCAACGCCA TTCCGGCGGG GCGGATTTTC GCCGAGGTGG TAACCGGTCA CAACTCCTTC
CAGGACGGCG AGGCCTTCAT CAAAAACGGC GGCCAGAAGG GGCCCCAGAT CGAGGTGCTC
CCTCCGGGGA AATACCGGAT CAACCCCTAC CTCTTCAAGC TGACCAAGGG GACTGTCACC
GAGATCAAGG ACACGGAAAT CGGCATCGTC GAGTCGGTGG ATGGCGCCGC CATCCCCGAG
GGTAAAATCT TCGCCAGGGC GGTGGAGGGG CACGCCTCCT TCCAAAACGG CGAGGCGTTC
ATCAAGAACG GCGGCCAGAA GGGGCCCCAG ATCGAGATCA TCCCGCCGGG CAACTACCGG
ATCAACCCCT ACCTCTTCAA GGTCACCAAG AGCCTCGCCA CCAAGATCAG CGAAGGGGAG
ATCGGCATGG TGGAGTCGTC GGACGGCTCG GCCATCCCCG CGGGGCGGAT CTTCGCCAAC
GTGGTGCCGG GGCACAACTC CTTTCAGGAC GGCGAGGCAT TCATCAAGAA CGGCGGCCAG
AAGGGACCCC AGATCGAAAT CCTGCCGCCG GGGGTCTACC GGATCCATCC CAATCTCTTC
CGCATCATGA AGGCGGCGGC GGTGGTCATC GCCAAGGGTG AGGTGGGGAT GGTCACGGCC
CAGGACGGCG AACCGATCCC AATGGGGCGG CTCCTGGCCC AGAGCGTGCC GGAGCACTCC
AACTTCGAGA ACGGCGAGGC ATTCCTGAAA AACGGCGGCC AGAAGGGGCC CCAGATCGAC
GTGCTCCTCC CCGGTACCTA CCGGATCAAC CTGAACCTGT TCCAGATCCA GATCGCCCCG
GCGGCGGTCG TGGAGGCCAA CAAGATCGGT CTGGTCACCG CCCTGGACGG CATCCCCCTG
CCGGAGCGGG AGTATGTCGC CTCCCCCATC ACCGGCCACA ACGACTACCA GGACGGCTCC
GCCTTCCTCA CCAAGAGCGG CCAGCGGGGA CCGCAGCTCG ACGTCCTTCG CCCCGGCACC
TACTACATCA ACCCCCTCAT GTTCAGCGTC GCCATTGACG ATGTGGCCGT GGTGGAGCGG
GGCCAGGTGG GGGTCATCGT CTCCAACGTG GGGGATGACC CGACGGAGGA GATGAAGAAG
CGGCTCGGCT CATCCCAGAC CGGCGCCTCC ATCGAGGAGG GGAAAGAGAA GTACGTGGTC
CCCAAGGGGT TCCGGGGGAT CCAGGAGGAG GTGGCCGGAC CCGGCCGTTA CTACCTGAAC
CGCCGGGCCT TCATGTGCTA CATCATCGAC ACCACCAACA TCACCATCGA CTGGGACGAC
CAGGAGGACA CCCGTTTCGA CCAGCTCACC GTCATCTCCA AGGACGGCTT CCCCATCCAG
GTGGCGGTTA AGGTGGTCAT CCGCGTCCGG CCCGACCAGG CCCCCTACAT GGTGGCAAAG
GTGGGATCCA TCGACAACCT GATCCAGCAC GTCATCCACC CCATGATCGA CTCCTCCTTC
CGCAACCAGG CCTCTACCGC CTCGGCCATG AACTTCCTCC AGAGCCGCTC CGAAGAGCAG
TCCAAAGCCG AGAGCCGTGC CCGCATCGAC CTGGAGAGGT ACCATGTGGA GTGTGTCTCC
GTACTCATAT GCCAGATCAA GCTCCCCGAA GACCTGATGG AGACCCAGAC CAAGCGGATC
ATCGCCGAGC AGCAGCAGGA GATGTACAAG ATGGAGCAGC GCTCCCAGGC CGAGCGGACC
GAGATGGAGA AGATGCGGGC CACCGCCGAC CAGCAGCCTA CCCTCGTGGC GTCTGAGATC
GCCGTGAAGG TGGCCACCCA GAAGAAGGCC GAGATGATCA CCCTGGCCGA AGGTACCGCC
GAAGCCCAGG CCCTGGAAGG GACCGGCGAA GGGAAGCGGC TGAAGGCCAT CGGCGACGGC
GAGGCGTCAA AGATCGCCGC CATCGGCGAC GCCACCGCCC AGGCCTACTC GAAACAGAAA
GAGGCCATCG GCGAAGACGC CATCAAGCAG ATCAAGATCG TCGAACTGAT CTCCGCCGCC
ATCGAAAACG GCCAGATCAA GATCGTCCCC GATGTGCTCG TCTCCGGCGG CGGCACAGCC
GGCGACGGGC TCATGGGGCA GTTGACCCGG CTGCTGCCGG GGGTGGATTT GAATGCGTTG
ATGGCGAAGG GGGGGAAGCA GCCTCAGGCG TGA
|
|---|
| Protein sequence | MLLNVVLDHW GYFAALVPIA VLLYASIVIV GGNEIALIER RWFGSKMPQG RVVALGNEVG
IQARTLGPGL HFLIPFIYKA TKSVFTEILD NEIGLIESVD GNAIPAGRIF AEVVTGHNSF
QDGEAFIKNG GQKGPQIEVL PPGKYRINPY LFKLTKGTVT EIKDTEIGIV ESVDGAAIPE
GKIFARAVEG HASFQNGEAF IKNGGQKGPQ IEIIPPGNYR INPYLFKVTK SLATKISEGE
IGMVESSDGS AIPAGRIFAN VVPGHNSFQD GEAFIKNGGQ KGPQIEILPP GVYRIHPNLF
RIMKAAAVVI AKGEVGMVTA QDGEPIPMGR LLAQSVPEHS NFENGEAFLK NGGQKGPQID
VLLPGTYRIN LNLFQIQIAP AAVVEANKIG LVTALDGIPL PEREYVASPI TGHNDYQDGS
AFLTKSGQRG PQLDVLRPGT YYINPLMFSV AIDDVAVVER GQVGVIVSNV GDDPTEEMKK
RLGSSQTGAS IEEGKEKYVV PKGFRGIQEE VAGPGRYYLN RRAFMCYIID TTNITIDWDD
QEDTRFDQLT VISKDGFPIQ VAVKVVIRVR PDQAPYMVAK VGSIDNLIQH VIHPMIDSSF
RNQASTASAM NFLQSRSEEQ SKAESRARID LERYHVECVS VLICQIKLPE DLMETQTKRI
IAEQQQEMYK MEQRSQAERT EMEKMRATAD QQPTLVASEI AVKVATQKKA EMITLAEGTA
EAQALEGTGE GKRLKAIGDG EASKIAAIGD ATAQAYSKQK EAIGEDAIKQ IKIVELISAA
IENGQIKIVP DVLVSGGGTA GDGLMGQLTR LLPGVDLNAL MAKGGKQPQA
|
|---|
| |