Gene Gmet_0013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_0013 
Symbol 
ID3739915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp20371 
End bp21297 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content68% 
IMG OID637777292 
Productdaunorubicin resistance ABC transporter ATP-binding subunit 
Protein accessionYP_382988 
Protein GI78221241 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID[TIGR01188] daunorubicin resistance ABC transporter ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.805584 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCGG CCCTTTCGCT TCGCGGCCTC ACCAAGCGCT TCGGCTCCCT CACGGCCGTG 
GATTCCTTCT CCCTGGAGGT GGAGCGGGGG ACCATCTTCG CGCTTCTCGG CCCCAACGGC
GCCGGGAAAA CCACCATCAT CCGGATCCTC ACTACGCTGC TGCGCCCCGA CGCCGGCACG
GCCCTGGTGG AGGGGTTCGA CGTGCGCCAG CAGGGGAAGG AGGTGCGGCG CCTCATCGGC
GTGGTCCCCC AGGAGAACAA CCTGGACCGC TACCTCACCG CCCGGGAGAA CCTGGTGATG
CAGGCCCGGC TCCACGGCAT GGGAGCCGCC GAGACGAACG GGCGGGTGGA CGAGCTTCTG
GAGCTGGTGG GGCTTACGGG GCGGCGCAAC GACTTTCCCG ACACCTTTTC CGGCGGCATG
CAGCGGCGCC TCGTGGTGGC CCGGGCACTG GTCCACCGCC CCCGGGTCCT CTTTCTCGAC
GAGCCCACCA CCGGTCTTGA CCCCCAGTCC CGCCGGGCAG TCTGGGACTA TGTGGACTCC
CTTAAGGATT CCATGACCAT CTTTCTCACC ACCCACTACA TGGACGAGGC CGACGCCCTC
TGCGACCGGA TCGTCATCAT GGACCACGGC CGGGTGCTCG TGGACGGGAG CGCGGCCCGG
CTCAAGGAGC GGATGGCCCA CGCCCACTGC TACGAGCTCC GGTTCCGGGC CAACGCCGAC
CACTACGAAA CGATCCTGGC GGGTTTCCCC TTTGTCCGCT CCCTCCAGCG GACCGGCGAC
CTCTTTCGCC TCTCCCTGGC CGGCGAGGAA AGCCTCAAGC CCCTCATGGA CGCCATCGGC
ACCGACGACA TCCGCACGAT CTGTCTCCGG GAGCCGACCC TGGAGGATGT GTTCATCGAG
CTGACGGGGA AAGAGGTGCG GGAATAG
 
Protein sequence
MASALSLRGL TKRFGSLTAV DSFSLEVERG TIFALLGPNG AGKTTIIRIL TTLLRPDAGT 
ALVEGFDVRQ QGKEVRRLIG VVPQENNLDR YLTARENLVM QARLHGMGAA ETNGRVDELL
ELVGLTGRRN DFPDTFSGGM QRRLVVARAL VHRPRVLFLD EPTTGLDPQS RRAVWDYVDS
LKDSMTIFLT THYMDEADAL CDRIVIMDHG RVLVDGSAAR LKERMAHAHC YELRFRANAD
HYETILAGFP FVRSLQRTGD LFRLSLAGEE SLKPLMDAIG TDDIRTICLR EPTLEDVFIE
LTGKEVRE