| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0011 |
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| Symbol | |
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| ID | 3739913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 17225 |
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| End bp | 18676 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637777290 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_382986 |
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| Protein GI | 78221239 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0404114 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTGC CGTACCACAC CATGCCTTTC AGGATCGCGG CGTACTATGC CCTCTGTGCA
GGGCTCTGGA TCCTCCTGTC CGACCGGCTC CTCGGGGTTG CCGTTCGGGA TCCCGACCTC
ATCACCAGCC TGGAGACGGC AAAGGGATGG CTCTTTGTGG CGGTCACCGC CCTCCTCCTC
CATGTGGTGG TCCGGCGCTT CGTCGATGAG GTGATGCGCC GGGAGGAACT TCTGCGGGAG
CGCAACGAAG AGCTCTGCAT GGTGGAGGAG GAGCTCCGCC AGCAGCTGGA CGAGTCCGAG
CGGGCCCAGC AAGAACTGCG GGAGAGCGAG GAAAACTACC GGCTCCTCTT TTCGAGCAAT
CCGCATCCCA TGTGCGTTTT CGATCTGGAG ACCCTCGCCT TCCTGGAGGT GAACGGATCG
GCTATCCAGC ATTACGGATA CAGCCGCGAA GAGTTTCTTG CCATGACCAT CAAGGACATC
CGTCCCCCCG AGGATGTGCC GTCGCTCATG GCTATCGTGA AGCGGGTCGA CAGCGGGCCT
GACCGGGTCG GCGTTTGGCG CCACCGGAAA AAGGACGGCA CGATCATCTC CGTGGAGATC
ACCTCTCACA TGATCGATTT CGCCGGAAGG CGTGCGAAGG TGATTCTGTG CAATGACGTA
ACGGAGCGGA TCAGAGCGAA GGAGGAGATC CTGCGACTCA ACGCCGAGTT GGAGCAGCGG
GTGCGGCAAC GGACCGCGGA ACTGGAGCAG GCCAACCGGG AGATGGAGTC CTTCAGCTAT
TCCGTTTCCC ACGACCTGCG GGCGCCGCTA CGCCACATCG ACGGGTTCAG TCGGGTGCTT
CTGGAAGACT GCGGCGACCA GCTCAATCAG GAGGGAAAGG GATACCTTAC CCGGATCTGC
GCCGCTGCCA ACCGGATGGG GCAGCTCATC GACGATCTCC TCCAGCTGGC CTCCGTGAGC
CGCAGCGAAC TGCAACGGCG CCCCGTCGAT TTCAGTAACC TGGCTCGGAC TATAGCCTTG
GAACTGAAGC AGACAGACCC GGAGCGTGAG GTTACCTTCA CCATTGCCGG GGGGGTCAGC
GCTCAGGGAG ATCCCGTCCT CCTGCGGGTC GTGCTGGAAA ACCTCCTGGG TAACGCCTGG
AAATACACGG GGAAGAATCA CCGCACCGCA ATCGAGTTCG GGGCAGTCGA GGGGGAGGAG
GGACGGGTCT ACTTCGTGCG GGATAACGGG GTCGGCTTCG ACATGACCTA CGTGGGCAAG
CTTTTCACCC CCTTCCAGCG GCTTCACGCC ATGGACGAGT TCGAGGGAAC CGGCATCGGG
CTGGCCACGG TGCGCCGGGT GGTGGAACGG CACGGCGGGC GGGCCTGGGC CGAAGGGACA
ATCGGCGCCG GCGCCACCTT TTACTTTACC CTGGGAGAAT CTCACCGCCT TGCGGAGGGC
GACGAAGGAT AA
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| Protein sequence | MKLPYHTMPF RIAAYYALCA GLWILLSDRL LGVAVRDPDL ITSLETAKGW LFVAVTALLL
HVVVRRFVDE VMRREELLRE RNEELCMVEE ELRQQLDESE RAQQELRESE ENYRLLFSSN
PHPMCVFDLE TLAFLEVNGS AIQHYGYSRE EFLAMTIKDI RPPEDVPSLM AIVKRVDSGP
DRVGVWRHRK KDGTIISVEI TSHMIDFAGR RAKVILCNDV TERIRAKEEI LRLNAELEQR
VRQRTAELEQ ANREMESFSY SVSHDLRAPL RHIDGFSRVL LEDCGDQLNQ EGKGYLTRIC
AAANRMGQLI DDLLQLASVS RSELQRRPVD FSNLARTIAL ELKQTDPERE VTFTIAGGVS
AQGDPVLLRV VLENLLGNAW KYTGKNHRTA IEFGAVEGEE GRVYFVRDNG VGFDMTYVGK
LFTPFQRLHA MDEFEGTGIG LATVRRVVER HGGRAWAEGT IGAGATFYFT LGESHRLAEG
DEG
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