Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_0002 |
Symbol | |
ID | 3739904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 1837 |
End bp | 2958 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637777281 |
Product | DNA polymerase III, beta subunit |
Protein accession | YP_382977 |
Protein GI | 78221230 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.394263 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATTCA AGATCGACAA GGAAACCTTC TCCCGGGCTC TCCAGAAGAT CCAGGGAATC GTCGAAAAGA GGAACACCAT GCCGATCCTC TCCAACGTCC TTATCGAGGC CCATGCCGAT CGGATCGAGC TGACGGCCAC GGACCTGGAA GTGGGAATGA AGAGTTCCTA CGAGACGACT GTGACCCGGG AGGGACGAAT CACCGTTTCG GCCAAGAAGC TCTACGAGAT CGTCAAGGAA CTCCCCGAGG AAGCCATCTC TTTCGCCACC AAGGAGAACG ACTGGGTGGA AATCCGCTGT GGCAAGGCCC ATTTCAGCAT CGTCGGCCTT TCCCCCGAGG AGTTTCCCTA TTTCCCCAAG GTGAACGAAG AGAGCCTGAT CCGGATCGAG GGGGCGCTCC TGGCCGACAT GATCGAGAAG ACCGCCTACG CCATCTGCTT CGACGAGACC AAGTACAACC TGAACGGCAC CTTCGTGAAG GCCACCGTTG AAGATGATAA ACCGATTCTC CGGATGGTGG CCACCGACGG CCACCGCCTC TCCATCGCCG AGAAGGAATT CCACGGGGCC GTGGGGCCCG AGATGGCCAA GGGGGTCATC TTCCCCAAGA AGGGTATCTT CGAGCTCAAG AAGATCTGCG AGGAGGCGAC CACCGAAGAA CTGGCCCTCG GCTTCATGGA CAACAGCGCC GTCATCAAGA AGGGGAACAC CGTGGTGGTG ATGCGGCTCG TGGACGGTGA GTTCCCCGAC TACACCCGCG TAGTCCCCGT GGCCAACGAC AAGATCGTGA CCGTGGCCCG GGATCCGTTC CTCCACTCCC TGCGGCGGAT GTCGATCCTC TCCAGCGAGA AGTTCAAGGG GATCCGGATG GAGATCAACG GCGAGCAGAT GATCATCTCC TCCAGCAACC CTGAACTGGG GGAAGCGTCG GAGGAACTGG ACGCGGCCTA CAGCGGCCCT CCCCTTTCCA TCCGGTTCAA TGCCAAGTAC CTCCTGGACG TCCTGGCGGT CCTCAACGAG AGCGAAGTGG CGCTGGTCCT CCGGGACGAG CTGTCGCCGG CCATCGTGAA ACCGGCCGCG GTCGACGGTT TCACCGCGGT GATCATGCCG ATGCGGCTGT AG
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Protein sequence | MEFKIDKETF SRALQKIQGI VEKRNTMPIL SNVLIEAHAD RIELTATDLE VGMKSSYETT VTREGRITVS AKKLYEIVKE LPEEAISFAT KENDWVEIRC GKAHFSIVGL SPEEFPYFPK VNEESLIRIE GALLADMIEK TAYAICFDET KYNLNGTFVK ATVEDDKPIL RMVATDGHRL SIAEKEFHGA VGPEMAKGVI FPKKGIFELK KICEEATTEE LALGFMDNSA VIKKGNTVVV MRLVDGEFPD YTRVVPVAND KIVTVARDPF LHSLRRMSIL SSEKFKGIRM EINGEQMIIS SSNPELGEAS EELDAAYSGP PLSIRFNAKY LLDVLAVLNE SEVALVLRDE LSPAIVKPAA VDGFTAVIMP MRL
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