| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_2664 |
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| Symbol | |
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| ID | 3737397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9605 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007516 |
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| Strand | + |
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| Start bp | 2474971 |
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| End bp | 2475957 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637777248 |
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| Product | type II alternative sigma-70 family RNA polymerase sigma factor |
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| Protein accession | YP_382944 |
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| Protein GI | 78214165 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02997] RNA polymerase sigma factor, cyanobacterial RpoD-like family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0927845 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGATCC CTCTGGAATC TTCCGCCACG ACAAAACAGT CGTCCCGGAA AGAACCTGCG
TTGCCGTCCA CCGGACGTCG ACCATCGACT CGACAAGGAG GGCGGCTTGC CACTGACTCC
ATTGGTTTTT ATCTGAGCAG CATCGGACGC ATTCCCTTGC TGACGGCAGC TGAAGAGATC
GAACTTGCAC ACCATGTGCA AGCGATGAAG CAACTTCAGG AGCTACCGGA AGAGGAGCTG
ACCTCCCGGC ATCGCCACAA GATCCGCATG GGCAAACGGG CCCGCGACAG GATGATGGCC
GCCAACCTCC GCCTCGTGGT GAGCGTGGCG AAGAAATACC AGAACCAGGG CCTGGAGCTG
CTTGATCTGG TTCAGGAAGG AGCCATCGGC CTCGAGCGAG CGGTCGACAA GTTCGACCCC
GCGATGGGCT ACAAATTCTC CACCTATGCC TATTGGTGGA TTCGCCAAGG CATGACGCGG
GCCATCGACA ACAGCGCCCG GACCATTCGT CTGCCGATCC ACATCAGTGA AAAGCTCTCC
AAGATGCGTC GCATCTCACG GGAGCTGTCC CACCGATTCG GTCGTCAACC GAATCGGCTG
GAACTGGCCA GCGCCATGGG CATCGAGCCC CGGGAACTGG AGGATCTGAT CTCCCAGAGC
GCACCTTGTG CATCCCTGGA TGCCCACGCC CGTGGCGAAG AAGATCGCAG CACCCTTGGC
GAATTGATCC CTGATCCCAA CGGTGAAGAG CCGATGGAGG GGATGGATCG CAGCATCCAG
AAGGAACATC TGGGCGGCTG GTTGTCGCAG CTGAACGAAC GCGAGCAGAA GATTCTGAAG
TTGCGGTTCG GTCTCGGCGG TGAAGAGCCT TTGACCCTTG CGGAGATCGG TCGTCAGATC
AATGTGTCCC GTGAGCGCGT TCGACAGCTC GAGGCCAAGG CGATTCTCAA GCTGCGCGCC
ATGACCAACC ACCAACAAGC CGCCTAA
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| Protein sequence | MGIPLESSAT TKQSSRKEPA LPSTGRRPST RQGGRLATDS IGFYLSSIGR IPLLTAAEEI
ELAHHVQAMK QLQELPEEEL TSRHRHKIRM GKRARDRMMA ANLRLVVSVA KKYQNQGLEL
LDLVQEGAIG LERAVDKFDP AMGYKFSTYA YWWIRQGMTR AIDNSARTIR LPIHISEKLS
KMRRISRELS HRFGRQPNRL ELASAMGIEP RELEDLISQS APCASLDAHA RGEEDRSTLG
ELIPDPNGEE PMEGMDRSIQ KEHLGGWLSQ LNEREQKILK LRFGLGGEEP LTLAEIGRQI
NVSRERVRQL EAKAILKLRA MTNHQQAA
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