Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_2657 |
Symbol | |
ID | 3737390 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | + |
Start bp | 2467254 |
End bp | 2468081 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637777241 |
Product | formate and nitrite transporters |
Protein accession | YP_382937 |
Protein GI | 78214158 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2116] Formate/nitrite family of transporters |
TIGRFAM ID | [TIGR00790] formate/nitrite transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00842969 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACTACG TCCTTCCTAA CGAGCTTGTC GACAGCATGA TTGGTGCTGG CGCCAAAAAA TCAACACTCA GCCCCAAACA ACTGCTACTC CGTGGCTTTT ACTCAGGATC AATCCTGGGT CTCGCTGTGA TCCTTGCCCT TACCTGTGGC ATTCTTACTA AACTCCCCTT TGTCGGTTCA CTTTTATTCC CCTTCGGCTT CGCCAGCATC GTGCTGTTCG GCATGGAACT GGTTACAGGT AACTTCGCGC TTCTCCCAAT GGCGTGTTGG GCTGGAAAAA CCTCCTGGAA AGCAACATTC GTAAATTGGG GTTGGGTATG GCTTGGTAAC TGGGCTGGCA CAGCTGCAGT CGCGTTGTTC ATGGCGCTAA GTCTTACAAG CGGCACCATG GATGCAGCTG CCGACAACAT TGGCCCCCCA ATTTGGGATC TTGTTGCGCA GAAAATTGTT GCACTTAACC AGATCAATGT TGAGAAGAAG TACGAAGCAC TTGGAGGATT GGGCTTCTTC CTTGCTTTCC TTCGCGGCGT TATTGCCAAT TGGCTGGTCT GCCTTGGGGT CACGATGGCG TCTGTAAGTA AAAGCGTCCC AGGTAAAATT ATTGGTTGCT GGCTCCCGAT CGTGGCATTC CAATCGATGG GTATGGAGCA CATCGTTGTG AATCAGTTCC TGCACACCGC CGGTCCAATT CTTGGATCCG GAGTGTCGAT GGGCAAGGTG TTTTTCTGGA ATTTCCTGCC TGTGACCATC GGTAATATCG TGGGTGGAAT GGTGTTCATC GGTGGAATGC TTTACGGCTC ACATAAAACA AAAACATCAG CAACGTGA
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Protein sequence | MDYVLPNELV DSMIGAGAKK STLSPKQLLL RGFYSGSILG LAVILALTCG ILTKLPFVGS LLFPFGFASI VLFGMELVTG NFALLPMACW AGKTSWKATF VNWGWVWLGN WAGTAAVALF MALSLTSGTM DAAADNIGPP IWDLVAQKIV ALNQINVEKK YEALGGLGFF LAFLRGVIAN WLVCLGVTMA SVSKSVPGKI IGCWLPIVAF QSMGMEHIVV NQFLHTAGPI LGSGVSMGKV FFWNFLPVTI GNIVGGMVFI GGMLYGSHKT KTSAT
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