Gene Syncc9605_2616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_2616 
Symbol 
ID3737505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp2428139 
End bp2428894 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content47% 
IMG OID637777200 
ProductATPase 
Protein accessionYP_382896 
Protein GI78214117 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID[TIGR03410] urea ABC transporter, ATP-binding protein UrtE 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0328199 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.247142 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACTG AAATTCCTGA ATCATCCACC ATGCACCCAA CTTCTACTGA CTTAATTCTT 
AAGGCTTCAG GTGTCAATGT TTACTATGGC GAAGGTCACA TTCTCAGGGA TGTCGATCTG
CAAATTCCCC AGGGAGAAAT GGTCTGCCTG ATCGGTCGAA ATGGTGTGGG TAAAACCACG
TTCCTGAAAA CATTGATTGG TCTGCTTCAA CAGAAAAGCG GGTCTATTGA ATACGAGTCA
ACCCAGCTAC TTAAACAACC TCCATATCGC CGAGCACGTA ATGGCATTGG CTATGTTTCC
CAAGGTAGGG ATATTATTCC GCGTCTGACA GTTCGTGAGA ATTTGATGCT TGGTATGGAA
GCATTACCTG GTGGAATGGG CAAAAATCGC CATATAGATC CTTTCATCTA CGAACTCTTC
CCTATTCTTG AAGAGTTTCT GAATCGTCGT GGTGGTGATC TTAGTGGTGG TCAACAGCAG
CAGCTCGCCA TTGCTCGTGC GTTGCTTGGC AAGCCCAAGC TGCTTTTGCT TGATGAGCCT
ACAGAGGGGA TTCAGCCATC AATCATCCTG GATATTGAGA GGGCTGTTCA ACGCATCATC
AAGGAGACAG GGATCAGCGT TTTGTTGGTG GAACAGCACC TCCATTTTGT GCGTCAATCT
AACTTCTACT ACGCCATGCA GCGTGGTGGA ATTGTCTCAA GTGGCCCTAC GTCCTCTTTG
TCCGAGTCTG TCATTCAGGA GTTTCTGACT GTTTGA
 
Protein sequence
MPTEIPESST MHPTSTDLIL KASGVNVYYG EGHILRDVDL QIPQGEMVCL IGRNGVGKTT 
FLKTLIGLLQ QKSGSIEYES TQLLKQPPYR RARNGIGYVS QGRDIIPRLT VRENLMLGME
ALPGGMGKNR HIDPFIYELF PILEEFLNRR GGDLSGGQQQ QLAIARALLG KPKLLLLDEP
TEGIQPSIIL DIERAVQRII KETGISVLLV EQHLHFVRQS NFYYAMQRGG IVSSGPTSSL
SESVIQEFLT V