| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_2606 |
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| Symbol | |
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| ID | 3735316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9605 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007516 |
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| Strand | - |
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| Start bp | 2420264 |
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| End bp | 2421991 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637777192 |
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| Product | alpha amylase domain-containing protein |
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| Protein accession | YP_382888 |
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| Protein GI | 78214109 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.281377 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCCCC CGCGCGACGA GACGCTGCGG ACCCTGCTTG GCGATCTGTA CCCCGTTGAT
TCTTCCGGGG ATGGCCAGGA GTTGTCGTCG CAATTGCTGC AGATCTTGAG CGAATCGTCA
GGAGATGGCG ATAAGGCAGA ACCCACGGAG CGCTGGGATG GCCGCGATGT GGTCTTGATC
ACCTACGCCG ACACCATTGG CGATGAGGGT GGGCCTGGTC TTCAAGCGCT GAAGTCGTTT
GTGAATCGCC ATCTGCAGCC CTTCGCAGCG GTGATTCATG TGCTGCCGTT CTTGGAATCC
ACCAGTGACG GCGGTTTTGC GGTGGCCAGC CACACGAAAC TCGAGCAGCG TTTCGGCGAT
TGGAGCGACC TTGCTGCCCT CTCCCAGGGC CGACGGCTGA TGGCCGATCT CGTTCTTAAT
CACGTGTCGG CCTCTCACCC CTGGGTGCAG CAGTTCATGC GCGATGAGCA GCCCGGCCGC
TCCTGTGTCC TGGAAGCAGC CCCCGATCCC TGCTGGGCGG ATGTGGTTCG TCCGCGCAGC
TCAAATCTGT TCACGCAATT GAGGGGGGCC AAGGGGTCGC GACAAGTCTG GACCACCTTT
GGTCCAGATC AGGTGGATCT CAACTGGCGC AGTGTGGAGG TGCTGCTGGG CTTTGCCCGT
CTCATGCAGC GGATGGCCCG GCATGGGGTG CGTTGGATCC GTCTGGATGC CGTGGGTTTT
GTCTGGAAGG AACCCCACAC TTCATGCATT CATCTGCCGC AGGCCCATCA ACTGGTTCGG
GTGCTGCGTC TGCTGCTCGA TCAGGTGGGT CCCGATGGCG TTGTGGTTAC GGAAACCAAC
GTGCCGGAGC AGGAAAATCT CTCCTATCTG AGGAGTGGTG ATGAAGCGCA TCTCGCTTAC
AACTTTCCCC TGCCGCCCTT GCTGCTGGAG GCCAGTGTCA GTGGTCGGGC TGACTTACTC
AATGCCTGGC TGAGTCGTTG GCCAGACTTG CCGCCGCAGA CAGGGCTGCT CAATTTCACC
GCCTGTCATG ACGGGGTCGG TTTAAGACCC CTGGAGGGTC TGATGCCCCA GAAGCGCTTG
CTGCAGCTGT TGATCGGCTG CGAGCAACGG GGTGGACTGG TCAGCCACAG GATGCTCAGT
TCCGGTGAGG AGGTCCCTTA CGAGATCAAC ATCAGCTGGT GGAGTGCCAT GGCGGATGGG
GGGATTGATC CCACGCATCT CCAAAGGGAG CGCTTTCTGC TCACCCAGCT GTTGATCCTG
GCCTTGCCAG GTGTCCCTGC CTTCTATCTG CCGGCGTTGC TGGCGGCTCC CAATGATTTG
ACTCGCTTTC GCCGCACGGG CCATCGCCGG GATCTGAATC GGCCCCAATT CACGGCCCAG
GCGCTGGAGC GTCGCCTGGC GGATCCCGAT TCAGATGTCT TCGCGCTGCT GCCGGTGTTG
CGGCGGGCTC TGGCTGAACG GGCTGTTCAC CCGGCCTTGC ACCCGGATGC CCCGATGACG
GTGCTGAGCA CGGACCGTAG TGATTGCGTC ATTCTGCGGC GCTCCCGTGG GGGGGAAACG
CTGGTGGCTG TTCACAACGT CACGTCAGCG CGCCTCAGCT TTCGCCTCAG GGGCCTGGGT
GGTGATCTGA ACCAGCCCTG GGCCGATTGC CTGAGCGGTC ATGTGTTCGA ACCACATCAG
TCGCATTCGC TAGAGCCTTA TGCGGTGCAT TGGTTGGTTC AGCCATGA
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| Protein sequence | MQPPRDETLR TLLGDLYPVD SSGDGQELSS QLLQILSESS GDGDKAEPTE RWDGRDVVLI
TYADTIGDEG GPGLQALKSF VNRHLQPFAA VIHVLPFLES TSDGGFAVAS HTKLEQRFGD
WSDLAALSQG RRLMADLVLN HVSASHPWVQ QFMRDEQPGR SCVLEAAPDP CWADVVRPRS
SNLFTQLRGA KGSRQVWTTF GPDQVDLNWR SVEVLLGFAR LMQRMARHGV RWIRLDAVGF
VWKEPHTSCI HLPQAHQLVR VLRLLLDQVG PDGVVVTETN VPEQENLSYL RSGDEAHLAY
NFPLPPLLLE ASVSGRADLL NAWLSRWPDL PPQTGLLNFT ACHDGVGLRP LEGLMPQKRL
LQLLIGCEQR GGLVSHRMLS SGEEVPYEIN ISWWSAMADG GIDPTHLQRE RFLLTQLLIL
ALPGVPAFYL PALLAAPNDL TRFRRTGHRR DLNRPQFTAQ ALERRLADPD SDVFALLPVL
RRALAERAVH PALHPDAPMT VLSTDRSDCV ILRRSRGGET LVAVHNVTSA RLSFRLRGLG
GDLNQPWADC LSGHVFEPHQ SHSLEPYAVH WLVQP
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