| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_2594 |
|---|
| Symbol | gcvT |
|---|
| ID | 3735304 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | + |
|---|
| Start bp | 2404838 |
|---|
| End bp | 2405965 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637777181 |
|---|
| Product | glycine cleavage system aminomethyltransferase T |
|---|
| Protein accession | YP_382877 |
|---|
| Protein GI | 78214098 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
|---|
| TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.26707 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTTCC CATCGGCCGC CCCCATGTCC CTGCAGCGCA CTCCCCTGTT CGAGTCCTGC
CGCAGCGCCG GGGGCCGCAT GGTGCCGTTT GCCGGCTGGG AGATGCCGGT TCAGTTCAGC
GGCCTGATCC AGGAACACAA GGCCGTTCGC GAACGGGTCG GCATGTTCGA CATCTCCCAC
ATGGGAGTGC TGCGCCTCGA AGGTGCCAAT CCCAAGGATG CGCTGCAACG GCTGCTCCCC
AGCGATCTGC ACCGCATCGG GCCCGGCGAA GCCTGCTACT CCGTTCTGCT GAACGAGCGT
GGCGGCATCC GCGACGACCT CATCGTTTAC GACTGCGGGG CCATCGATGC CGAACGGGGT
GCGCTGATGC TGGTGATCAA TGCCGCCTGC GCCGACAGCG ACACCGCCTG GATCCGTGAA
CAGATGGAGC CCGCTGGCCT GAAGGTGACC GACATCAAAA AGGACGGCGT GCTGCTCGCT
CTACAAGGCC CTGAAGCCAT AGGGGTGCTT CAGGAGCTGA GCGGCGAAGA GCTCAGCGGC
TTGCCCCGCT TCGGCCACCG GATGCTCAAC CTCAAAGGAC TTAGACAACC GGTGTTTAGT
GCTCGCACGG GCTACACCGG CGAAGACGGT GCCGAGCTGC TGCTCAACGC CGATGACGGA
CAAAAGCTCT GGCAGCTCTT GCTCGATCGC GGTGTCACCC CCTGCGGCCT GGGGGCGCGG
GACACCTTGC GGCTGGAGGC CGCTATGCAC CTTTACGGCC AGGATATGAA CGACGAAACC
AACCCCTTCG AGGCGGGATT GGGTTGGCTC GTGCACCTGG AAATGCCCGT GAATTTTGTG
GGCCGGCAGG CACTGGAGCA AGCTGCGGAA TCCGGACCCA CCAAACGCCT CGTGGGGCTC
AAGCTGCAGG GTCGTGCCAT CGCCCGCCAC GACTACCCCG TTGTCCATAA CGGTGAGACG
GTGGGCATCG TCACCAGCGG CACCTGGTCC CCCACCCTGG AAGAAGCGAT CGCCCTGGCC
TACGTTCCGC CGTCCCTCGC CAAGCTCGGC ACAGAACTGA GCGTGGAGAT CCGCGGTAAG
GCCCAACCGG CAACGGTCGT TCGCAAGCCC TTCTACAAAC GCGCCTGA
|
|---|
| Protein sequence | MRFPSAAPMS LQRTPLFESC RSAGGRMVPF AGWEMPVQFS GLIQEHKAVR ERVGMFDISH
MGVLRLEGAN PKDALQRLLP SDLHRIGPGE ACYSVLLNER GGIRDDLIVY DCGAIDAERG
ALMLVINAAC ADSDTAWIRE QMEPAGLKVT DIKKDGVLLA LQGPEAIGVL QELSGEELSG
LPRFGHRMLN LKGLRQPVFS ARTGYTGEDG AELLLNADDG QKLWQLLLDR GVTPCGLGAR
DTLRLEAAMH LYGQDMNDET NPFEAGLGWL VHLEMPVNFV GRQALEQAAE SGPTKRLVGL
KLQGRAIARH DYPVVHNGET VGIVTSGTWS PTLEEAIALA YVPPSLAKLG TELSVEIRGK
AQPATVVRKP FYKRA
|
|---|
| |