| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_2579 |
|---|
| Symbol | |
|---|
| ID | 3735789 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | - |
|---|
| Start bp | 2392079 |
|---|
| End bp | 2392825 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637777165 |
|---|
| Product | phycobilisome rod-core linker polypeptide (L-RC 28.5) |
|---|
| Protein accession | YP_382862 |
|---|
| Protein GI | 78214083 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.71401 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.118163 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGCCTCTC TTTCTGCCAG GGCTCGCCTG CCATTCAAGC CATCAAGTCA AAACTCTCGA
GTTGACTCAA TATCAGCTTC TCGTCAACCC TGTTTGGATC GAGCGCCTGA TTTGTCGTCA
GAAATAATTG AAAGATGTTA TCGGCAGATA TATTTTCATG CAATGAGTTG TGATCGTGAT
CGATTTTTAG AATCACAGCT TAGTTCAGGT TCTATCACCG TAAGAGATTT TATAAGAGGA
CTACTACTTT CAGATCGTTT TTATAGGGGT TACGTCGAAT GCAATGGAAA CGATCGACTA
GTTGAGCAGG TCATAGGCCG TGTCCTTGGT CGTCCTGTTT ACGGACAAGA TGAAGTGAAA
TCTTGGTCCA TTGTTATTGC CGAGCAGGGA TTTGCAGCTT TTGTTGATGA CATATTGGGA
TCTCCTGAGT ATTTTGAGAG ATTTGGAATT GATGGAATTC CCGATCAAGT AAATCGTATT
TTGCCAGGAC GCTCTCAAGA AGAGATGCCT ATCTATGAGC GACTTCCTCG CTATGGAGAA
AGTTGGCGTG ATCGACTGAT TCGTGATGGA TTAATGATCT CTGTAGATGC CTTCAATAAA
ATCAGGCGGC CAATGACGGT ATCCCGTCTG ATCTATGAAA AGCCTGAGGG TCGTCTTTTA
AAACTCTGGC TTGTTTTCTT GTTTGTTTTA GGTGTTGGAA GTGTTTCCTT GGTGCTTTTA
GTCTTCCGTC TGATGTTCAC GATTTGA
|
|---|
| Protein sequence | MASLSARARL PFKPSSQNSR VDSISASRQP CLDRAPDLSS EIIERCYRQI YFHAMSCDRD
RFLESQLSSG SITVRDFIRG LLLSDRFYRG YVECNGNDRL VEQVIGRVLG RPVYGQDEVK
SWSIVIAEQG FAAFVDDILG SPEYFERFGI DGIPDQVNRI LPGRSQEEMP IYERLPRYGE
SWRDRLIRDG LMISVDAFNK IRRPMTVSRL IYEKPEGRLL KLWLVFLFVL GVGSVSLVLL
VFRLMFTI
|
|---|
| |