Gene Syncc9605_2556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_2556 
Symbol 
ID3737077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp2371251 
End bp2372048 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content64% 
IMG OID637777141 
Productputative multidrug efflux ABC transporter 
Protein accessionYP_382839 
Protein GI78214060 
COG category[R] General function prediction only 
COG ID[COG4587] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATCT TTGGGCTGAA CCGGCGGATC ATCCGGGTTT TGCTGGGCTC CCAGTACGCC 
CACATGCTCG AGTACCGCGC CGAGATCGCC CTCTGGGCTT TGTCCGGTGT GTTGCCGTTC
ATCATGCTCA GCGTCTGGAG CGGCAGTGAC GCGCGCTCGG GGTTGGGGCT GGATGGCGTG
GCCCTGGATC GCTATTTCCT CAGCGCCTTT TTGGTGCGCC AGTTTTCGGT GGTGTGGGTG
GTCTATGCCT TCGAGGAAGA CGCCCTGCTG GGTCGGCTCT CTCCTTACCT GCTGCAACCG
CTGCATCCGC TTTGGCGTTA CGTGGCGGCC CACCTCGGTG AGCAGCTCAC CCGTCTGCCC
TTTGCGGCTC TGATTGCAGC GGTGTTTTTT GCGGTGCGGC CCCAGGCCAT CTGGTTGCCG
TCGTTGGGTG GCTTCCTGCT GGCCTGGCTG GCCACTTGGA TGGCCTTCGC CATTGCTTTC
CTGTTCCAGA GTTTGATTGC GGCCTTCTGC TTCTGGAGTG AAAAGGCCAG TGCCCTGGAG
CGGCTCCAGT TCATTCCATT CCTGTTTCTT TCCGGTTTGT TGGCACCGCT AACGGCCTTT
CCGCCGGTGG TGCGGGCCTT GGCCCAGTGG ACGCCCTTCC CCTACCTGAT CGACTTCCCG
GCCCGGGTGC TGGCGGGTCA GCCGGTGGAT TTGTTGGCGG GCTTCGGGGC GCAACTGGCC
TGGATCGCTC TGCTGTTGCC GCTGGTGCTG CTGCTATGGC GGGCCGGCGT GCGGCGCTAC
AGCGCCATGG GGGCCTGA
 
Protein sequence
MRIFGLNRRI IRVLLGSQYA HMLEYRAEIA LWALSGVLPF IMLSVWSGSD ARSGLGLDGV 
ALDRYFLSAF LVRQFSVVWV VYAFEEDALL GRLSPYLLQP LHPLWRYVAA HLGEQLTRLP
FAALIAAVFF AVRPQAIWLP SLGGFLLAWL ATWMAFAIAF LFQSLIAAFC FWSEKASALE
RLQFIPFLFL SGLLAPLTAF PPVVRALAQW TPFPYLIDFP ARVLAGQPVD LLAGFGAQLA
WIALLLPLVL LLWRAGVRRY SAMGA