| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_2538 |
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| Symbol | |
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| ID | 3737953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9605 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007516 |
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| Strand | - |
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| Start bp | 2354011 |
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| End bp | 2356893 |
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| Gene Length | 2883 bp |
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| Protein Length | 960 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637777123 |
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| Product | glycine dehydrogenase |
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| Protein accession | YP_382821 |
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| Protein GI | 78214042 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0403] Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain
[COG1003] Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain |
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| TIGRFAM ID | [TIGR00461] glycine dehydrogenase (decarboxylating) |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCATTCGA CGTTGACTTC TCCTTTTGCG CAGCGGCATA TCGGCCCGAG TGAGGCGGAA
CAGCTCCGCA TGCTCAATGC CCTGGGCTAC AGCGATCTGC AGGAGTTCAT CGCTGATGTC
GTGCCCGCCG ACATCCTCGA TTCCAAGCCG CCGGTTGAGG CCTTGCCCGA GGGGTGTGGG
GAGGCAGAGG CCCTCCAGCA GCTGAAGCAG TTGAGCGAAA CCAACACGCT GCGACGCTCC
TTGATCGGGC TGGGTTATTA CGGCACGGCA ACCCCGGCCC TGATCCAGCG CCACGTTTTT
GAGAATCCGG CCTGGTACAC CGCCTACACC CCCTATCAGG CGGAAATCGC CCAGGGTCGT
CTGGAGGCCC TGCTCAACTT TCAAACCCTG ATCAGTGAGC TCACGGGCTT GCCGATCGCC
AACGCGTCGC TGCTTGATGA AGCCACCGCC GCCGCGGAGG CGATGAGCCT CAGCTTCGGG
GTGTGCCGTC GCCCCGAGGC GACACGGTTC CTGGTGGACG CCAATGTGCT GCCCCAGACC
TGGGCGGTGC TGCAGACCCG CGCCGAACCC CTCGGCATCA GCCTCGAGTG CATCGACCCG
GCCACAGCGC CGATCGATGC GTCAGTGTTC GGCGTTCTGC TGCAGCTGCC CGGCGCCGAT
GGATGCCTTT GGGATCCATC CGCCGTGATC CAAGCGGCCC ATGCCGCCGG TGCCTTGGCC
ACCGTGGCCA TTGACCCCTT GGCGCAGACC CTAATGGCGC CCGTGGGATC CCTCGGGGCC
GACATTGCCG TGGGCAGCGC CCAACGCCTG GGGGTGCCGA TGGGATTCGG TGGTCCTCAC
GCCGCCTTCT TCGCCACCGT TGAGGCCTAC AAGCGCCAGA TCCCCGGTCG TCTGGTGGGG
CAGTCCAAGG ATGCGGAGGG CCGTTCCGCC CTGCGCTTGG CGCTGCAAAC CCGTGAGCAG
CACATCCGTC GCGACAAGGC CACCAGCAAC ATCTGCACGG CCCAGGTGCT GCTGGCCGTG
ATGGCCTCCT TTTATGCGGT GCACCATGGC CCTGATGGTC TGCAGGCCAT TGCTCAGCGC
ATTGTTGGCT TGCGCAGCCA GCTGGAGCAG GGCCTGCGGG CCCTGGGTTA CCCGCTGCAG
CTGGCCGACC GTTTCGACAC CGTCACCGTT CACTGTGTGT TGGCACCGGC TGTGCACCGC
GCTGCCGCAG TTGCTGGTTT CAATCTGCGG GTGCTGCCAG ATGGTGCAGC GCCGGCGGAC
GCCACCGGAT TCGGCATCAG CCTCGATGAG CTCTCGGATC AACAGGAGCT GCAAGCCCTG
CTCGCCCTGC TGGCGGAGGC CTGCGGTCAG GTCCCCCCGC AGCTGGAGGC TGCGCAGCCC
CCGTCCCTCT CCCTGCCGCA GCGCAGCCAG CCCTGGCTGA GCCAGTCGGT TTTCCATCAG
TACCGCAGCG AATCGGAGCT GCTGCGCTAT ATCCAGCGGT TGGTGAGCCG TGATCTGTCG
CTGGTGCACG GGATGATCCC GTTGGGCAGT TGCACCATGA AGCTCAACGC CGCCGCTGAG
CTGCAGCCGG TGAGCTGGCC TGCGTTTGCG GCCTTGCATC CCTTTTCCCC AGCCGATCAG
GCCCAGGGCT ATCGCCGTCT GGCCGACGAT CTGGAGCAAT GGCTGGCTGC ACTGACGGGC
TTTGCTGCCG TGTCGTTACA GCCCAATGCC GGGTCCCAGG GGGAATACGC CGGGCTGCTG
GTGATCCGCG CCTGGCACCA CTCCCGCGGT GAAGCCCATC GCGACATCTG TCTGATCCCC
ACCAGCGCCC ACGGCACCAA CCCCGCCAGT GCCGTGATGG CCGGCCTCAA GGTGGTGGCC
GTCGCCTGTG ATGACGAGGG CAACATCGAC CAGCAGGATC TTGCGGCGAA GGCGGCCGAG
CACGCCGACC GGCTGGCGGC ACTGATGGTC ACCTACCCCT CCACCCACGG CGTGTTTGAA
ACCGGCATCC GTGAGATCTG CGCGGTGGTG CATCGGCATG GGGGCCAGGT GTACCTCGAC
GGGGCCAACC TCAATGCCCA GGTGGGGCTG TGCCGTCCTG GTGCTTTCGG TGCCGATGTC
TGCCACCTCA ACCTGCACAA GACATTTTGC ATCCCCCATG GGGGCGGTGG CCCAGGCGTG
GGGCCTATTG GTGTGGCGGC GCATCTGGAG CCCTTCCTGC CGGGGCACCC CTTGCAGGCC
GGCGCTGCAT CGGCCATCGG TCCGGTGTCC GCAGCTGCGC TCGGTAGCGC CAGCATCCTG
CCGATTAGCT GGATGTACCT GCGGATGATG GGGGCGGAGG CCCTGCGGCA GGCCAGTGCC
TTGGCGCTGT TGTCGGCTAA TTACCTCGCC CATCGGCTCG ATGCCTCGTA CCCCGTGCTG
TTTCGCGGCA GCACCGGCCG GGTGGCCCAT GAATGCATCC TCGACCTCCG CCCGCTCAAG
CGGGATGCGG GGATCGATGT GGATGACATC GCCAAGCGTT TGATGGACTA CGGCTTCCAT
GCGCCCACCG TCAGCTGGCC GGTGGCCGGC ACGGTGATGG TGGAGCCCAC CGAAAGCGAA
AGCCTGGCGG AGTTGGATCG TTTCGCCGAT GCCCTGGTGG CGATCCGCGA GGAGATTCGC
GCCATTGAAG CCGGCACCAG CGACCCTCAG AACAACCCGC TCAAGCGGGC TCCCCACACC
CTCGCTGCCG TCACAGCGGA TACCTGGGAT CGTCCCTACA GCCGTCAGCA GGCCGCCTTC
CCGATGGAGG AGCAGCAGGA GAGCAAGATC TGGCCCGCTG TGGCACGGAT TGACAACGCC
TTTGGTGACC GCAACCTGGT GTGCACCTGT CCGTCTGTGG AATCGGTGGC TGTGGCGGTT
TGA
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| Protein sequence | MHSTLTSPFA QRHIGPSEAE QLRMLNALGY SDLQEFIADV VPADILDSKP PVEALPEGCG
EAEALQQLKQ LSETNTLRRS LIGLGYYGTA TPALIQRHVF ENPAWYTAYT PYQAEIAQGR
LEALLNFQTL ISELTGLPIA NASLLDEATA AAEAMSLSFG VCRRPEATRF LVDANVLPQT
WAVLQTRAEP LGISLECIDP ATAPIDASVF GVLLQLPGAD GCLWDPSAVI QAAHAAGALA
TVAIDPLAQT LMAPVGSLGA DIAVGSAQRL GVPMGFGGPH AAFFATVEAY KRQIPGRLVG
QSKDAEGRSA LRLALQTREQ HIRRDKATSN ICTAQVLLAV MASFYAVHHG PDGLQAIAQR
IVGLRSQLEQ GLRALGYPLQ LADRFDTVTV HCVLAPAVHR AAAVAGFNLR VLPDGAAPAD
ATGFGISLDE LSDQQELQAL LALLAEACGQ VPPQLEAAQP PSLSLPQRSQ PWLSQSVFHQ
YRSESELLRY IQRLVSRDLS LVHGMIPLGS CTMKLNAAAE LQPVSWPAFA ALHPFSPADQ
AQGYRRLADD LEQWLAALTG FAAVSLQPNA GSQGEYAGLL VIRAWHHSRG EAHRDICLIP
TSAHGTNPAS AVMAGLKVVA VACDDEGNID QQDLAAKAAE HADRLAALMV TYPSTHGVFE
TGIREICAVV HRHGGQVYLD GANLNAQVGL CRPGAFGADV CHLNLHKTFC IPHGGGGPGV
GPIGVAAHLE PFLPGHPLQA GAASAIGPVS AAALGSASIL PISWMYLRMM GAEALRQASA
LALLSANYLA HRLDASYPVL FRGSTGRVAH ECILDLRPLK RDAGIDVDDI AKRLMDYGFH
APTVSWPVAG TVMVEPTESE SLAELDRFAD ALVAIREEIR AIEAGTSDPQ NNPLKRAPHT
LAAVTADTWD RPYSRQQAAF PMEEQQESKI WPAVARIDNA FGDRNLVCTC PSVESVAVAV
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