Gene Syncc9605_2532 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_2532 
Symbol 
ID3737947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp2349413 
End bp2351206 
Gene Length1794 bp 
Protein Length597 aa 
Translation table11 
GC content67% 
IMG OID637777117 
Productputative flavoprotein 
Protein accessionYP_382815 
Protein GI78214036 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0426] Uncharacterized flavoproteins
[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCAGCA CCGCAACCAC GCGTCGCACG ATCCAGCTGC CGATCGACGA TGGGGTCATT 
GGTCTGCGCG GTCTGAGCCC CCAGCGGCAC CGCTTCGAAC TGGAATATGC CCTGGAGCGG
GGCAGCACTG CCAACAGCGT GCTGTTTGAA GCCGGTGATG GCGCCCCGGC CGTGCTGGTC
CACCCTCCCG GCATGGCCTA CAGCGCGGCC TTCCTGCCGG TGCTTGCCGA CGCCCTGCCC
AGCTGCGACG CGCTGCTGGT GGTGGTGGGC CACGTCAACC CCAACCGCGT TGCCCTGCTG
AGGGAACTGG CGGAGACCTA TGCCGGTCTG GAACTGATCG TCTCCAACCC GGGCGCCAAG
TTGATCGAGG AGCTGTGGAG CCAACGCAAG CCGGCCCCTC CCGGTGAGAC GAGCGAGCAA
CCACCACTGC CAGACCTGCC GCCGCTGCGG GTCATCCGCC ACGAGCAACC ACTTCCCCTC
AGCCATCAGC GCAGCTTGAT GCTGCTGCCA GCCCCAACCC CCCGCTGGCC GGGCGGATTG
CTGGCGTTCG AGGAAAGCCT GGGCCTGCTG ATGAGCGACA AGTTCTTCAG TGCCCACCTC
TGCACGGACA GCTGGGCCGA ACGCAACCGC AGCAGCACCG AAGAAGAGCG CCGTCACTTC
TATGACTGCC TGATGGCCCC CATGGCCCGT CAGGTGGATG CCCTGGTGGA ACGGCTCGAA
GAACTCGACA TCCGCACCAT CGCACCGGGC CATGGTCCGG CGATTGAAGC CAGTTGGCGC
AGCCTGCTGA ATGATTACCG CCGCTGGGGC GAAGGCCAGC AAACCGCCAG CCTGACGGTG
GCCCTGCTGT TCGCCAGCGC CTACGGCAAC ACCGCAGCCA TTGCCGACGC TCTGGCCCGC
GGGGTCAGCC GCACCGGCAT CCGGGTGAGC AGCTTGAACT GCGAATTCAC CCCCGCCGAT
GAACTGGTGA GCACGGTCCA GCAGGCCGAT GCCGTGTTGA TCGGCTCACC AACCCTGGGG
GGCCATGCCC CTACACCGAT CGTCTCAGCC CTGGGAACCC TGTTGGCGGA GGGGGATCGC
AGCAAGCCCG TGGGAGTGTT CGGCAGCTTC GGCTGGAGCG GCGAGGCGGT GGATCTGCTG
GAAACGAAGC TGCGGGATGG CGGCTTCAGC TTTGGCTTCG AGCCGATCCG GGTGAAGTTC
AGTCCGGATG CTGCCCGGGT GAAGGAGCTG GAGGAAACCG GCACCCGTTT CGCCCGCCAG
CTGCTGCAGA GTCAGAAACG GGCGCAACGG CGCAGTGCAG GGGGCTTGAG CGAAAGCCGC
AGCGATCCAG CGGTGCTGGC GTTGGGCCGT GTGATCGGCT CCCTCTGTGT GCTCACCACC
CGCAAAGCCG ATCTGAGCGG CGCCATGGTG GCCAGCTGGG TGAGTCAGGC CAGCTTCAAT
CCCCCCGGCA TCACCGTGGC CGTGGCCAAG GACCGTGCTG TGGAAGCACT GCTGCACAAG
GGCGATCGCT TCGCCTTGAA CGTGCTGGCC GAAGGGCGCG AAACCGCCTT GATGAAGCAG
TTCCTGCAAC CGTTCGAACC CGGTGCCGAT CGCTTTGCAG GCCTTGAGCT GGACACCAGC
CCCGCCGAGC AGCCGTTGCT GCCGGATGCC CTGGCCTGGC TGGACGGCAA GGTGAGCCAG
CGGATGGAAT GCGGCGACCA CTGGCTGATC TACGCCGAAG TGGATCACGG CGGGGTGCTG
GATGCGGAGG GCAGCACCGC GGTGCACCAA CGCCGCAGCG GAGCCAACTA CTGA
 
Protein sequence
MTSTATTRRT IQLPIDDGVI GLRGLSPQRH RFELEYALER GSTANSVLFE AGDGAPAVLV 
HPPGMAYSAA FLPVLADALP SCDALLVVVG HVNPNRVALL RELAETYAGL ELIVSNPGAK
LIEELWSQRK PAPPGETSEQ PPLPDLPPLR VIRHEQPLPL SHQRSLMLLP APTPRWPGGL
LAFEESLGLL MSDKFFSAHL CTDSWAERNR SSTEEERRHF YDCLMAPMAR QVDALVERLE
ELDIRTIAPG HGPAIEASWR SLLNDYRRWG EGQQTASLTV ALLFASAYGN TAAIADALAR
GVSRTGIRVS SLNCEFTPAD ELVSTVQQAD AVLIGSPTLG GHAPTPIVSA LGTLLAEGDR
SKPVGVFGSF GWSGEAVDLL ETKLRDGGFS FGFEPIRVKF SPDAARVKEL EETGTRFARQ
LLQSQKRAQR RSAGGLSESR SDPAVLALGR VIGSLCVLTT RKADLSGAMV ASWVSQASFN
PPGITVAVAK DRAVEALLHK GDRFALNVLA EGRETALMKQ FLQPFEPGAD RFAGLELDTS
PAEQPLLPDA LAWLDGKVSQ RMECGDHWLI YAEVDHGGVL DAEGSTAVHQ RRSGANY