Gene Syncc9605_2524 details

Gene Information

• Locus tag: Syncc9605_2524
• ID: 3737939
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Synechococcus sp. CC9605
• Kingdom: Bacteria
• Replicon accession: NC_007516
• Strand: +
• Start bp: 2335890
• End bp: 2339321
• Gene Length: 3432 bp
• Protein Length: 1143 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 637777109
• Product: VCBS
• Protein accession: YP_382807
• Protein GI: 78214028
• TIGRFAM ID: [TIGR01965] VCBS repeat

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.543748
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 10
• Fosmid unclonability p-value: 0.893675
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAATCAAG GCCTTATGAG CAACCTGCTC GTCGCCGATG GCGAATGCCC CAAGATTCGA 
GAGCTGCTGG CTGAAGCCCT CGTACCTGTG CTCTGGCTGA AGGCCGGGCA ACACCCCCTT 
GAGACCGTTA CAGCTGCACT GGAGATGCGG CGACAGCAGG GGCAGCCAGT AGAGACGCTG 
CACTGGGTGA GCCATGGACG ACCTGGGGTA TTGCAGGTGG CCGCGCACGA AATCACGCGT 
CAAACGCTGT TTCTGCATCG CGCTGACCTG GAAACGTGGG GAATCAAAAA TCTGGCCTTG 
TGGAGCTGCC GCTATGGCGC CGAGCCGGAG GCCGTCAGCC TGCTGGAGGG ATTCACCGGA 
GCATCAGTCT TTGCCAGCAC AAACGTCCTT GGCCGCACAA GCGAAGCAAT TACACAGTGG 
AAGCTTGGAG ACACCCTTAT CACAATTCCG GTTGACTCAG CACATCTGAG CAGGTGGGCG 
CACCAGTTAG GCGAAAAGAT GTACACAACC CATGAAAATG GCACTAAACT TGGTTATGTA 
GAAAAATCCG ATAATTCATT CACAGACCTT GGTAATTTTA ACGACGGAAC TGACAATCTG 
ACCAGGGTCT GGGGGCTCGC CTTTAGCCAA GACGGGAATT TATATGTAAC GCAAGAATTC 
GCCAGTTTCT TTCATGACCC AACGGGCACT GGTACCAAGA TCTACAGAGT AGATCTCACG 
TCATCAACCG ATCCCGCCAC AACCGTCCTA ACTCAAGCGG GGATCGAAGT CACCACAGAC 
TCAAGCGTTG CTGGCGACCC AGGTGGACCG ATCCAGTTCC ATGCCGTGGA CGTTGACTCT 
GACGGCTTGA TGTATGCACT CGACCTTAGG GGCTACATCT ACTCAATTGA TATTACGACA 
GGTGCCGCAA CCTACGTCGC AGAAACAAGC AAGAGCGATA ACTCAAAAAT AACAAGCGCG 
ATGGATATTG CCTTCGATAT CGAGGGCAAT CTTTTTGCCG TCGATGGAGA CGGAGCTCTT 
TATCAGATCT CACTGGATGG AACCACAACA GCCGGGGCGA CGCAGCTGGG CTCAACTTCC 
ACCTCTATGC TGATGGGGCT TCTAGTCACG TCAGACAACA CACTGTACGG GACTAATCTT 
TCAAGCGGCA AGCTCTTTTC AATTAACAAG AGCACCGGCA CTCTCACCGA AGAAACCTCC 
ACTAGCTTTG CCACCTATCC CCATGGAGGT GACGCCTACA TTGCCTATAC AGGGTGGCCT 
AGTAGCCCTG GCGCTCCCGT AATTTCATCC GCCAGCTACG ACGCATCCAC CGGCGCACTA 
ACCGTCACTG GAATCGACCT TCCGGCTTAT TCCGGAGCAA CGAACGATAT CGATATCTCA 
AAACTCACCC TCACCGGTGA AGGCGGCGCG ACATACACCC TCACTTCTGA TGATGTTGAA 
CTCACCTCTT CCACTGAGTT CTCAATCACC CTCAATGCCG CCGATCAACT CCAACTTGCC 
GGACTCTTAA ATAAAAACGG CACCTCCTCT GGCGGAGGCA CCACTTACAA CATTGCCGCA 
GCAGAAGACT GGACGCCGGG AGCTGATGCA TCCACCGATA TCGCGGACCT CACAGGAAAC 
GCGATTACCG TCTCCAACGT TGCCGCTCCC ACCCTCACCT CCGCCAGCTA CGACGCATCC 
ACCGGTGCAC TAACCGTCAC TGGAATCGAC CTTCCGGCTT ATTCCGGAGC AACGAACGAT 
ATCGATATCT CAAAACTCAC CCTCACCGGT GAAGGCGGCG CGACATACAC CCTCACTTCT 
GATGATGTTG AACTCACCTC TTCCACTGAG TTCTCAATCA CCCTCAATGC CGCCGATCAA 
CTCCAACTTG CCGGACTCTT AAATAAAAAC GGCACCTCCT CTGGCGGAGG CACCACTTAC 
AACATTGCCG CAGCAGAAGA CTGGACGCCG GGAGCTGATG CATCCACCGA TATCGCGGAC 
CTCACAGGAA ACGCGATTAC CGTCTCCAAC TTCAATAACG CGCCCGTCAC AGGCAGCGCC 
AGCGGCACCC TTGCATTCAC AGAAGGTGAT GGTGCAACCG TCATTGATCC CAGCCTCACC 
ATCACCGATG ACGATGACAC CAACATCGAA TCGGCCACCA TCACCATCTC CTCCGGTTAC 
CAGTCCGCAG AAGATGTCCT CGCTTTCTCC GATACCTCCG CCATCACAGG CTCCTGGAAT 
ACATCCACGG GCGTCTTAAC CCTCACAGGC TCCGACACCC TTGCCAACTA CGAGACAGCT 
CTCGAATCCG TCACCTACAA CAACACTTCC GACAACCCCA ACACCGAAAA CCGCAGCATC 
TCCTGGGTCG TCAATGACGG CACCGATTCT TCCTCCGCTG TCACCTCAAG GGTCACCATC 
ACTGCCGTCA ATGACGCGCC TGTCCTCACA ACACCCACAG CTGGCTCCAT CGCAGAAACC 
GCTGGATCCT CAGACAACAC AACATCAGGA CTAACAGGCA CCCTTTCCGC CTCTGATGCC 
GATGGAGACA CCCTCACTTA CGCCATCAAT GGCGGATCCA CCACCGATGG AGTCTCCACT 
CTCGCTGGCT CCTACGGCTC ACTCTCCCTC AACACCTCCA CCGGCGCTTA CGCCTACACA 
CCAGACTCCT CCGCCGTAAA AGCTCTCGAT GACGGCGATT CCGCCGCCGA TTCCTTCACA 
CTCACCGCCT CTGACAGCAC TGACACAACA TCAGCCACTT ACACCGTCAA CCTCACTGGT 
GCTGACGAGC CAACACCTTC ACCAACCCCA ACACCTTCAC CAACCCCAAC ACCTTCACCT 
TCGCCAGACC CTTCGACTAG TCCAACACCT TCGCCTTCGC CAGACCCTTC GACTAGTCCT 
ACACCTTCCT CCAAAAGCAG CAACGTAAAG CTTCCTTCCA TCGATGACGC CACAACTCAA 
CAAGAGACGT CCACCTTTGA ATTAATCAAT CCCACCAAAG TCCGCGAAAA AGAAATCAAC 
AGCATCATCG TTGGCACCGA AAAGAAGGAA AAAATTACCG GCACATCTTC CGGGGAAATC 
ATTGCTGGCA TGTCTGGCAA AGACGAAATC AAAGGCAGTG GAGGATCAGA CGGGTTCCTC 
TTTCAAGATC CCAATAATTT TGGCAAAAAA GAACGAGATA CAATTCTCGA CTTCACACCC 
AAAGAAGGCG ACTCACTACT AATCGACAAG GACGTCTTTG ATTTCGGCAA CAACCTAAAA 
GTAAAAGCAA TCAAAAACAA GAAAGAAGCA AAAAAGCAAG ATGATTCGAA AGCAGACTTT 
ATATACGAAG AGAAGAAAGG GCTTCTCTGG TACAACGAAA ATGGCAAGAA AGACGGCTGG 
GGCGATGGCG GCCTCTTCGT GAAACTAAAG GGCGCACCTG AACTCAGCGA ATCAGATTTC 
ACGATTGTCT GA 

 

Protein sequence

MNQGLMSNLL VADGECPKIR ELLAEALVPV LWLKAGQHPL ETVTAALEMR RQQGQPVETL 
HWVSHGRPGV LQVAAHEITR QTLFLHRADL ETWGIKNLAL WSCRYGAEPE AVSLLEGFTG 
ASVFASTNVL GRTSEAITQW KLGDTLITIP VDSAHLSRWA HQLGEKMYTT HENGTKLGYV 
EKSDNSFTDL GNFNDGTDNL TRVWGLAFSQ DGNLYVTQEF ASFFHDPTGT GTKIYRVDLT 
SSTDPATTVL TQAGIEVTTD SSVAGDPGGP IQFHAVDVDS DGLMYALDLR GYIYSIDITT 
GAATYVAETS KSDNSKITSA MDIAFDIEGN LFAVDGDGAL YQISLDGTTT AGATQLGSTS 
TSMLMGLLVT SDNTLYGTNL SSGKLFSINK STGTLTEETS TSFATYPHGG DAYIAYTGWP 
SSPGAPVISS ASYDASTGAL TVTGIDLPAY SGATNDIDIS KLTLTGEGGA TYTLTSDDVE 
LTSSTEFSIT LNAADQLQLA GLLNKNGTSS GGGTTYNIAA AEDWTPGADA STDIADLTGN 
AITVSNVAAP TLTSASYDAS TGALTVTGID LPAYSGATND IDISKLTLTG EGGATYTLTS 
DDVELTSSTE FSITLNAADQ LQLAGLLNKN GTSSGGGTTY NIAAAEDWTP GADASTDIAD 
LTGNAITVSN FNNAPVTGSA SGTLAFTEGD GATVIDPSLT ITDDDDTNIE SATITISSGY 
QSAEDVLAFS DTSAITGSWN TSTGVLTLTG SDTLANYETA LESVTYNNTS DNPNTENRSI 
SWVVNDGTDS SSAVTSRVTI TAVNDAPVLT TPTAGSIAET AGSSDNTTSG LTGTLSASDA 
DGDTLTYAIN GGSTTDGVST LAGSYGSLSL NTSTGAYAYT PDSSAVKALD DGDSAADSFT 
LTASDSTDTT SATYTVNLTG ADEPTPSPTP TPSPTPTPSP SPDPSTSPTP SPSPDPSTSP 
TPSSKSSNVK LPSIDDATTQ QETSTFELIN PTKVREKEIN SIIVGTEKKE KITGTSSGEI 
IAGMSGKDEI KGSGGSDGFL FQDPNNFGKK ERDTILDFTP KEGDSLLIDK DVFDFGNNLK 
VKAIKNKKEA KKQDDSKADF IYEEKKGLLW YNENGKKDGW GDGGLFVKLK GAPELSESDF 
TIV