| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_2520 |
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| Symbol | |
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| ID | 3737935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9605 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007516 |
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| Strand | + |
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| Start bp | 2330541 |
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| End bp | 2333738 |
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| Gene Length | 3198 bp |
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| Protein Length | 1065 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637777107 |
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| Product | DEAD/DEAH box helicase-like |
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| Protein accession | YP_382805 |
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| Protein GI | 78214026 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.138323 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.614208 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTGC TGCACGCCAC CTGGCTTCCC GCCATCCGCA CCTCCAGCAG TTCCGGTCAA
CCGGCACTGC TCGTTTGGGC TGACACCTGG CGGGTGGCCA CACCGGAAGG CCCGGGCCTT
ACCCCAGCGC TGCACCCCTT CACCCTAAGC CATGAAGACC TCAGGGCCTG GCTGAGCGAA
CGCGACCTCT TGCCCGGCGG CTGCATCGAT GCCACGGCGT GCCTCACCCT GCCGAGCCGC
ACGGTGAAGC TGCGCAAAAG CCGCAGCACA AAAGAGGAGC CAACACCGGA ACCACCGGGT
TGGACCGGGC TACCGATGCA GGCCGGCGAA CCGATCCCCA AGCAAACCGA ATGGTGGCCC
TGGCAGGTGC AGGGGCTCGC GGTGGAACCG TCGGCAGCCA CGGAGTGGCT GTCCCGATTG
CCGCTCTCCG GCACCAATCC AGACCTGGCT GATGAACTGC GCTGGTGGAG CCATCTGCAG
CGCTGGGCCT TGAGTCTGGT GGCCCGGGGC CGCTGGATTC CCCAGATGGA GTTCAGCAAA
GGGGAGGGCT ATCCCCATCG GGCCCGTTGG GTGCCGCTTC TCAACCGGGA AGAAGACCGG
CGCCGGCTGG AGGATCTGGC GGCCAGCCTG CCGCTGGTGG CCACCTGCGC CTTGCCCTGG
CGGGAACCCC TGGGGCGCCG CAGCAACCGC ACCACCCGGT TACGACCGGA GGCGATGCGA
GCCGCCAACC CTGTGGCCAG CTGCCGGCCC CGCAGCGGAC GCCTGCGGGT GGCGACGCTG
CTGGAAGATC TAGTGGACGC GCAGCTGCGC AAGGACTTTG AACCCTCCAC CGATGGGCTT
GATCCCCTGC TGACCCTCTG GCAGGAGGCC CTGGGGTCGG AGACCGGGGT GATCGAGATC
GGCGATGAAG AGGCCGAACG CCTGGCCACC GCCAGCCATC ACTGGCGGGA GGGCATCGCC
GGCGATTTTG CTGCGGCCCG CACCTGCCTT GAACTGCACA CCCCACCGGA TGGGGAGGAT
CTCTGGGAGC TGCGCTTCGG GCTGCAGGCG GAAGCTGACC CCAGCCTGAA GCTCCCGGCC
GCCGCGGCCT GGGCGGCTGG TGCGGAACCG CTACAGCTTG GAGAGATCCG GGTGGACCAA
CCGGGTGAAG TGCTGCTGGA AGGCATGGGC CGCGCCCTGA GCGTGTTTCC GGCAATTGAG
CGGGGTCTGG AGAGCGCCAC ACCTGAAACG ATGCAGCTCA CCCCGGCCGA GGCCTTCGTG
CTGGTGCGCA CGGCCGCCCG GCAGCTGCGG GATGCCGGCG TGGGAGTGGA GCTGCCGCCC
AGCCTCTCCG GTGGCCTGGC CAGCCGACTG GGCCTGTCGA TCAAAGCGGA ACTGCCCGAA
CGCTCGAGCG GTTTCACGTT GGGTGAGTGT CTGGCCTGGG AGTGGGATCT GATGATCGGC
GGGGTGACGC TCACCCTGCG GGAATTGGAG CGCCTGAGCG GCAAGCGCAG CCCCCTGGTG
CGCCACAAGG GGGCCTGGAT CGAACTGCGG CCCAACGACC TCAAAAATGC CGAACGCTTC
TGTGGGGCGA AACCTGAACT GAGCCTCGAC GACGCGCTGC GGCTGACGGG GACGGAAGGG
GAACTGTTGA TGCGGATGCC GGTGCACCGC TTCGACGCCG GCCCACGGCT GCAATCGGTG
TTGCAGCAAT ACCACCAGCA GAAGGCCCCC GACCCCTTGC CGGCCCCGGA AGGATTCAGC
GGGCAGCTGC GGCCTTATCA GGAGCGGGGC CTCGGCTGGC TCGCCTTCCT GCACCGCTTC
GATCAAGGGG CCTGTCTAGC TGACGACATG GGCTTGGGCA AAACCATTCA GTTGCTAGCG
TTCCTGCAGC ACCTCAAAGC GGAGCAAGAA CTGAAACGCC CGGTGCTGCT GGTGGCCCCC
ACATCGGTGC TCACCAACTG GCGACGGGAG GCGGAATCGT TCACTCCAGA GTTGAAGGTC
ACCGAGCATT ACGGGCCTCG CCGGCCCTCC ACACCCGCCG AACTCAAAAA AGCGTTGAAG
GAGGTGGATC TGGTGCTCAC CAGCTACGGG CTGCTGCAGC GTGACAGCGA ACTGCTGGAA
ACCCAGGACT GGCAGGGGGT GGTGATTGAC GAAGCCCAGG CGATCAAGAA CCCTGGCGCC
AAACAGAGCC AAGCCGCCCG GGATCTGGCC CGCACCGGCC GCATCAAGAG CAACCGCTTC
CGCATCGCAC TCACCGGCAC CCCCGTGGAA AACCGGGTGA GCGAACTGTG GGCCTTGATG
GACTTCCTCA ACCCAAAGGT GCTTGGGGAA GAAGACTTCT TCCGCCAGCG CTATCGGATG
CCGATTGAGC GCTACGGCGA CATGTCGTCC CTGCGGGACC TGAAAGGCCG CGTGGGTCCG
TTCATCCTGC GCCGGCTGAA AACCGACAAG ACGATCATTT CCGACCTGCC TGAAAAGGTG
GAGCTGAGCG AATGGGTGGG GCTGAGCAAG GAGCAGAAAT CTCTGTACAG CAAGACCGTG
GAAGACACCC TCGATGCCAT TGCCCGGGCG CCGCGCGGGC AGCGCCACGG GCAGGTGCTG
GCCCTGCTCA CCCGGCTGAA ACAGATCTGC AACCATCCCG CCCTGGCCCT GAGCGAAGGG
GCCGTGGACG ATGGCTTCCT GGGCCGTTCG GCCAAGCTGC AGCGGCTGGA GGAGATCCTC
GATGAGGTGA TCGAAGCGGG CGATCGGGCC CTGCTGTTCA CCCAGTTCGC CGAATGGGGG
CATTTGCTAA GGGCCTGGAT GCAGCAGCGC TGGAAATCAG AAGTGCCCTT CCTGCACGGC
GGCACCCGCA AGAACGAACG CCAGGCGATG GTGGATCGCT TCCAGGAGGA TCCCCGCGGT
CCACAGCTGT TCCTGCTCTC GCTCAAGGCC GGTGGTGTGG GCCTCAACCT CACGCGGGCC
AGCCATGTGT TCCACATCGA TCGCTGGTGG AACCCTGCCG TGGAAAACCA GGCCACCGAC
CGGGCCTATC GGATCGGCCA AACGAACCGA GTGATGGTTC ATAAATTCAT CACCAGCGGT
TCGGTGGAGG AAAAAATCGA TCGCATGATC CGCGAGAAAT CACGCCTGGC CGAAGATGTG
ATCGGCTCCG GCGAAGATTG GCTGGGAAGC CTCGGTGGCG ATCAATTGCG CGATCTCGTT
TCTTTGGAGG ACACCTGA
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| Protein sequence | MSLLHATWLP AIRTSSSSGQ PALLVWADTW RVATPEGPGL TPALHPFTLS HEDLRAWLSE
RDLLPGGCID ATACLTLPSR TVKLRKSRST KEEPTPEPPG WTGLPMQAGE PIPKQTEWWP
WQVQGLAVEP SAATEWLSRL PLSGTNPDLA DELRWWSHLQ RWALSLVARG RWIPQMEFSK
GEGYPHRARW VPLLNREEDR RRLEDLAASL PLVATCALPW REPLGRRSNR TTRLRPEAMR
AANPVASCRP RSGRLRVATL LEDLVDAQLR KDFEPSTDGL DPLLTLWQEA LGSETGVIEI
GDEEAERLAT ASHHWREGIA GDFAAARTCL ELHTPPDGED LWELRFGLQA EADPSLKLPA
AAAWAAGAEP LQLGEIRVDQ PGEVLLEGMG RALSVFPAIE RGLESATPET MQLTPAEAFV
LVRTAARQLR DAGVGVELPP SLSGGLASRL GLSIKAELPE RSSGFTLGEC LAWEWDLMIG
GVTLTLRELE RLSGKRSPLV RHKGAWIELR PNDLKNAERF CGAKPELSLD DALRLTGTEG
ELLMRMPVHR FDAGPRLQSV LQQYHQQKAP DPLPAPEGFS GQLRPYQERG LGWLAFLHRF
DQGACLADDM GLGKTIQLLA FLQHLKAEQE LKRPVLLVAP TSVLTNWRRE AESFTPELKV
TEHYGPRRPS TPAELKKALK EVDLVLTSYG LLQRDSELLE TQDWQGVVID EAQAIKNPGA
KQSQAARDLA RTGRIKSNRF RIALTGTPVE NRVSELWALM DFLNPKVLGE EDFFRQRYRM
PIERYGDMSS LRDLKGRVGP FILRRLKTDK TIISDLPEKV ELSEWVGLSK EQKSLYSKTV
EDTLDAIARA PRGQRHGQVL ALLTRLKQIC NHPALALSEG AVDDGFLGRS AKLQRLEEIL
DEVIEAGDRA LLFTQFAEWG HLLRAWMQQR WKSEVPFLHG GTRKNERQAM VDRFQEDPRG
PQLFLLSLKA GGVGLNLTRA SHVFHIDRWW NPAVENQATD RAYRIGQTNR VMVHKFITSG
SVEEKIDRMI REKSRLAEDV IGSGEDWLGS LGGDQLRDLV SLEDT
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