| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_2518 |
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| Symbol | alaS |
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| ID | 3737933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9605 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007516 |
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| Strand | - |
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| Start bp | 2327433 |
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| End bp | 2330102 |
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| Gene Length | 2670 bp |
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| Protein Length | 889 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637777105 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_382803 |
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| Protein GI | 78214024 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTGCCG TCGCATCGTC GTCTTCTGCA GCGTCTGCAC CGCGCAGTGG GGAGGAGATC
CGTGAAGCGT TCCTCAACTT CTACGCCGAG CGCGGCCACA AGCGGATGGC CAGTGCCTCG
TTGATTCCCG ACGACCCAAC GGTGCTGCTC ACCATTGCTG GAATGCTGCC GTTCAAGCCA
GTGTTCCTCG GCCAGCAGGA GCGACCTGCG CCACGGGCCA CAAGCTCGCA GAAGTGCATC
CGCACCAACG ACATCGAGAA CGTGGGGCGC ACGGCCCGGC ATCACACCTT CTTCGAGATG
CTCGGCAACT TCTCGTTTGG GGACTACTTC AAGCAACGGG CGATTGAGTG GGCTTGGGAG
CTCAGCACCG GCGTCTATGG CATCGATCCC AAGAACCTGG TGGTGAGCGT CTTCCGGGAA
GACGACGAAG CCGAGCTGAT CTGGCGTGAT GTGGTGGGGG TGAACCCCAA GCGGATCATC
CGCATGGATG AGGCCGACAA CTTCTGGGCG TCGGGCCCCA CCGGCCCCTG TGGCCCCTGC
TCGGAGATCT ATTACGACTT CAAGCCCGAG CTCGGGGATG AGGACATCGA TCTCGAAGAC
GACGACCGGT TCATCGAGTT CTACAACTTG GTGTTCATGC AGTACAACCG CGACGCGGAG
GGCACCCTCA CGCCGCTGGC CAACCGCAAC ATCGACACCG GCATGGGCCT TGAGCGGATG
GCCCAGATCC TTCAGAAGGT TCCCAATAAT TACGAAACCG ATCTGATCTT TCCGCTGATC
CAAGCGGCCG CCGATCTGGC GGGGGTTGAT TACCACCAAC TCAACGACAA GGGCAAGACG
TCGTTGAAGG TGATCGGCGA TCACAGCCGT GCGGTGACGC AGCTGATCTG CGATGGCGTC
ACCGCCAGCA ACCTCGGCCG CGGCTACATC CTGCGGCGCT TGCTGCGCCG GGTGGTGCGC
CATGGCCGCC TGCTGGGCAT CGACAAACCC TTCCTCGTCA CAATGGGCGA GGCAGCGATC
GCCCTGCTGA AGGGGGCTCA CCCCAGCGTG ATCGAGCGTC AGGAGGTGAT CCTGGCCGAG
CTCCAGCGGG AGGAAGCCCG CTTCCTTGAG ACCCTCGAGC GCGGCGAGAA GTTGCTGGCG
GAGGTGCTGG CCTCCAAGCC CACCCAGATC AGCGGTGCCC AGGCCTTTGA GCTGTACGAC
ACCTATGGCT TTCCGCTGGA GCTCACCCAG GAGATCGCGG AGGAGCAGGG CCTGGCCGTT
GACCTCGATG GGTTCGAGGC GGCAATGGAG GAGCAGCGTC AGCGCGCCAA GGCGGCCGCG
GTGAGCATCG ATCTCACCCT GCAGGATGCA ATCGACCAGG TGGTGGCGGA TCAGGCGGCC
ACCTGTTTCG AGGGGTATGA AGCCCTCGAT CACGCCTCCT GCGTGCAGGC GTTGGTGGTG
AACGGTGGAC CATCCACCAC CGCTAAGGCG GGCGATGCGG TTCAGGTGGT GCTCGACACC
ACGCCGTTCT ATGGAGAGGG CGGCGGTCAG GTGGGCGATC GTGGGGTGCT GGCGGGCAGT
GATTTGATCG TTCGGATTGA GTCGGTGAGC CGCAGTCGCG ACGTCTTCGT CCATGCCGGG
CGGGTGGAAC GGGGTGAGCT CGCCCTGGGC GACACCGTGA AAGCTCAGGT GGACCGCGCC
TGCCGGCGTC GGGCCCAGGC GAATCACACA GCCACCCACC TGCTGCAGGC TGCGCTCAAG
CAGGTGGTGG ATCCAGGCAT CGGCCAGGCC GGATCACTGG TGGATTTCGA TCGCCTGCGC
TTCGACTTCC ACTGCCCCAC GGCGGTGACG CCGGATCAGT TGCAGCAGGT TGAAACCCTG
ATCAACGGCT GGATCAACGA AGCCCATGCG CTGCAGGTGC AGGAGATGGC GATTGATCAG
GCCAAAGCGG CCGGTGCGGT GGCGATGTTC GGTGAGAAAT ACGCCGATGT GGTGCGGGTG
GTCGACGTGC CCGGTGTGTC GATGGAGCTC TGCGGCGGCA CCCACGTCAC CAACACCGCG
GAGATCGGCC TGTTCAAGAT CGTGGCGGAA AGTGGCGTGG CGGCCGGCAT CCGTCGGATC
GAAGCCGTCG CTGGTCCTGC CGTGCTCGCT TATCTGAACG AGCGCGATGT GGTGGTGAAG
CAGCTGGGGG ATCGCTTCAA GGCCCAGCCG GCCGAGATCG TGGATCGTGT GGCGGCCCTT
CAGGAGGAGC TCAAGGCCAC CGGCAAGGCG CTGGCCGCGG CTCAGGCGGA ACTGGCGGTG
GCCAAGGCCG GTGCTCTGGC CGCAAAGGCC GAGGCCGTGG GCGACTTCCA ACTGCTGGTG
GAACGCCTTG ATGGTGTGGA TGGCGCCGGT TTGCAGGGCG CAGCCCAGAG CCTGGCGGAT
CAGCTGGGGG ATGGTGCTGC CGTGGTGATC GGCGGTCTGC CGGATCCCGG CGACATGGGC
AAGGTGATCC TGGTGGCCGC CTTTGGCCAG CAGGTGATCG CCGCCAAGCT TCAGGCCGGC
AAGTTCATCG GCGGGATCGC CAAACAGTGC GGTGGTGGCG GTGGTGGACG CCCGAACCTG
GCCCAGGCCG GCGGTCGTGA TGGTGCTGCC CTGCCTGGTG CTCTTGATGC AGCTCAAGCT
GAGCTGACGT CGGCCTTTCG TGCTTTGTGA
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| Protein sequence | MVAVASSSSA ASAPRSGEEI REAFLNFYAE RGHKRMASAS LIPDDPTVLL TIAGMLPFKP
VFLGQQERPA PRATSSQKCI RTNDIENVGR TARHHTFFEM LGNFSFGDYF KQRAIEWAWE
LSTGVYGIDP KNLVVSVFRE DDEAELIWRD VVGVNPKRII RMDEADNFWA SGPTGPCGPC
SEIYYDFKPE LGDEDIDLED DDRFIEFYNL VFMQYNRDAE GTLTPLANRN IDTGMGLERM
AQILQKVPNN YETDLIFPLI QAAADLAGVD YHQLNDKGKT SLKVIGDHSR AVTQLICDGV
TASNLGRGYI LRRLLRRVVR HGRLLGIDKP FLVTMGEAAI ALLKGAHPSV IERQEVILAE
LQREEARFLE TLERGEKLLA EVLASKPTQI SGAQAFELYD TYGFPLELTQ EIAEEQGLAV
DLDGFEAAME EQRQRAKAAA VSIDLTLQDA IDQVVADQAA TCFEGYEALD HASCVQALVV
NGGPSTTAKA GDAVQVVLDT TPFYGEGGGQ VGDRGVLAGS DLIVRIESVS RSRDVFVHAG
RVERGELALG DTVKAQVDRA CRRRAQANHT ATHLLQAALK QVVDPGIGQA GSLVDFDRLR
FDFHCPTAVT PDQLQQVETL INGWINEAHA LQVQEMAIDQ AKAAGAVAMF GEKYADVVRV
VDVPGVSMEL CGGTHVTNTA EIGLFKIVAE SGVAAGIRRI EAVAGPAVLA YLNERDVVVK
QLGDRFKAQP AEIVDRVAAL QEELKATGKA LAAAQAELAV AKAGALAAKA EAVGDFQLLV
ERLDGVDGAG LQGAAQSLAD QLGDGAAVVI GGLPDPGDMG KVILVAAFGQ QVIAAKLQAG
KFIGGIAKQC GGGGGGRPNL AQAGGRDGAA LPGALDAAQA ELTSAFRAL
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