Gene Syncc9605_2515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_2515 
Symbol 
ID3737930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp2321887 
End bp2323839 
Gene Length1953 bp 
Protein Length650 aa 
Translation table11 
GC content58% 
IMG OID637777102 
Productadenylyl cyclase class-3/4/guanylyl cyclase 
Protein accessionYP_382800 
Protein GI78214021 
COG category[T] Signal transduction mechanisms 
COG ID[COG4252] Predicted transmembrane sensor domain 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.764918 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTGA ACGGGAATCA CCTCCACAGT GCAAGTCTCA GAAAAGCCAT GAAACGGTCA 
CACCATTTCG AATGGATTCG ACGTTTTGGC CCAACGCTGC TGCTCAGCGG ATTGGTCCTC
ACGGTCGGGG GAGTCGGTAA GGAGCGGTTA AGCCAACTTG ACCTGCGCTT TGCTGACTGG
GTCCAAGAAA CCCGAGGGCC CCGAAATGCA CCAAAAGGAG TGGTGATCGT TGCGATCGAC
GACTTCAGCC TTCAGCAAGC TGCCAACGCC GACCTGAGCC GTGACCCTCT GCTCCAAAAC
CTGAACCAAT GGCCTTGGCC AAGGAGGGTG CACGTGAAAG TGTTGGAACG TCTGTTTGAA
GCAGGCGCTT CCGCCGTTGG ATTTGACCTG CTGTTCGAAG CACCCAGCAG CCACGGAACA
GACGACGATG CAGCATTCGC CGGTGCATTG AGGCGCTATC GCGACCGCGT GGCACTTGGT
GTGCAGGTGT TGAGCGGCCG GGGCCCCGTG GCAAGCATGT CCTTGCTGGA CCTGACTCCC
GCCCTACAAC CAGCTGACCA ATCACTGAAC CGAGGGCTTC TCAATGGATC TCCAGATCCA
GACGGTGTGA TTCGTCGGCG GCCTGGACAC AGTGCAGCGG AGATGCGCCA GCACCTGGGT
TCCTCCGTCC CCGATGGACT GGCCAAGACC TTGCTCGAAC TTGCCAACGC TGACATCAAT
CTCGACGACA AACTCTTGGA TCTGTTGGAT CCCTACGGAC CTCCTGGAAC GATTCCAACC
ATCTCGATCT GGGAACTTCT CGACGCCAAC GCCTTCCTCA CGATCAAGAA AAGCGGCGTG
CTCAGGGATG CCACGGTGCT CGTGGGACCG ACAGCAGCCG TGTTTCAAGA CCTCCATCCA
GCCGTCTTCT CAGGTGCACA AGGTATGCCG GGCGTGGAAT TGCATGCCAC CGAGGTCGCC
AACCGACTGG AAGATCGCTC ACTTCGCTGG ATACCTGCTC CACCGGGCTG GAATCTTGCG
ATGGCGCTTC TGGTGCTCGT TGCAGGCATC TCCACATCGC GCCAGGAGCG GCCTCTGCCA
AGACTTGGAG TCCTGTTGGC AGCCTCCGGT GTCCTCGTGA CAGCAGGTGC CTGGCTGATT
GCCTGGGGCG GCCTCCTGCT ACCAGTGCTG GGGCCTACGG TGTGCCTGAT CCTGACCGGG
ATTGTCTCCA GCGCCGACGC CACCCTTCGA CTCCAGTGGC AACGGCGACG TTTGCGCCGA
ACGCTGGGTC GTTATCTCTC TCCCGCAGTC GCAGCCGAGA TCGCCGACCA GCCAGAAGAA
GCCGATGAAC TGCTGGGTGG GAAGTTGATG GATGTAGTAG TTCTGATGAG CGACATTCGT
GGCTTTACAA CGTTCACCCA GGAGATGACC CAACGAGGTG ATGTGAAAGG ACTGGTTGAT
CGACTCAACA CCTACTTCAG CGAGGTGGTG GACGCCGTAC ATTCGCAGGG AGGAACCGTT
GATAAATTCG TTGGGGATGC TGTTCTTGCG GTGTTTGGAG CGCCGCTACA AAAAACAAGC
AGCACCAACG TGATTGCTGG AGTCAAAACG GCGATAACCC TTCAGCAGCG CCTCGCCGCT
CTAAATCGCA CCTGGGTCTC TCAAGGGCAA TCACCATGGA AGCAAGTGGT GGTGCTCAGC
TATGGCTGGG TTGTGAGCGG CAACATTGGC TGCTCCAGCC GCATGGATTA CACCGTCATC
GGCGATGCCG TCAACACAGC CAGCCGATTG GAGGCGATTG CCAAGCAATG CGGCCAGTCG
ATTGTGATGA GTGCTGCGGT GGCAGAACAT CTACCCAGTG ATTGGCGTGT GCAGAACCTG
GGCACCTTTC CAATACGTGG GCAAGGCCAG CAACAGGTGT TCGCACTAAA AACTGACACC
GCGGAGGTCA CCCGACAGGA CACAGATCTG TAA
 
Protein sequence
MALNGNHLHS ASLRKAMKRS HHFEWIRRFG PTLLLSGLVL TVGGVGKERL SQLDLRFADW 
VQETRGPRNA PKGVVIVAID DFSLQQAANA DLSRDPLLQN LNQWPWPRRV HVKVLERLFE
AGASAVGFDL LFEAPSSHGT DDDAAFAGAL RRYRDRVALG VQVLSGRGPV ASMSLLDLTP
ALQPADQSLN RGLLNGSPDP DGVIRRRPGH SAAEMRQHLG SSVPDGLAKT LLELANADIN
LDDKLLDLLD PYGPPGTIPT ISIWELLDAN AFLTIKKSGV LRDATVLVGP TAAVFQDLHP
AVFSGAQGMP GVELHATEVA NRLEDRSLRW IPAPPGWNLA MALLVLVAGI STSRQERPLP
RLGVLLAASG VLVTAGAWLI AWGGLLLPVL GPTVCLILTG IVSSADATLR LQWQRRRLRR
TLGRYLSPAV AAEIADQPEE ADELLGGKLM DVVVLMSDIR GFTTFTQEMT QRGDVKGLVD
RLNTYFSEVV DAVHSQGGTV DKFVGDAVLA VFGAPLQKTS STNVIAGVKT AITLQQRLAA
LNRTWVSQGQ SPWKQVVVLS YGWVVSGNIG CSSRMDYTVI GDAVNTASRL EAIAKQCGQS
IVMSAAVAEH LPSDWRVQNL GTFPIRGQGQ QQVFALKTDT AEVTRQDTDL