| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_2470 |
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| Symbol | rplA |
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| ID | 3737874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9605 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007516 |
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| Strand | - |
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| Start bp | 2275593 |
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| End bp | 2276300 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637777059 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_382757 |
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| Protein GI | 78213978 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.538849 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0799081 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAAAA TCTCCAAGCG TCTGGCCAGC CTGGCCGGCA AGATCGAGGA CCGTGCTTAC
GCACCCCTCG AGGCGATTGC CCTGGTGAAG GACAACGCCA ACGCGAAATT CGACGAGACG
ATGGAGGCAC ATGTGCGCCT CGGCATCGAT CCGAAGTACA CCGACCAGCA GCTGCGCACC
ACCGTGGCTC TGCCTAACGG CACCGGTCAG TCCGTGCGCA TCGCTGTGGT GACCCGCGGT
GAGAAGGTGG CTGAAGCCAA AGCCGCTGGT GCTGAACTCG CCGGTGAAGA AGACCTGGTG
GAAAGCATCA GCAAGGGCGA AATGGATTTC GACCTGTTGA TTGCCACCCC CGACATGATG
CCCAAGGTGG CCAAGTTGGG TCGGGTTCTC GGCCCCCGTG GCTTGATGCC CAACCCCAAG
GCAGGCACCG TCACCACGGA CCTCGAGGCC GCGATCAAGG AATTCAAGGC CGGCAAACTT
GAATTCCGTG CCGACCGCAC CGGCATCGTC CACGTCCGCT TCGGCAAGGC CAGCTTTAGT
GCCGATGCCC TGCTGCAGAA CCTCAAGACC CTGCAGGAAA CCATCGACCG CAACAAGCCC
AGCGGTGCCA AAGGCCGCTA CTGGAAGTCC CTGTATGTGA CCTCCACCAT GGGTCCTTCC
GTTGAAGTCG ATTTCTCTGC TCTGCAGGAC ATCGAGCAGG GGAGCTGA
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| Protein sequence | MPKISKRLAS LAGKIEDRAY APLEAIALVK DNANAKFDET MEAHVRLGID PKYTDQQLRT
TVALPNGTGQ SVRIAVVTRG EKVAEAKAAG AELAGEEDLV ESISKGEMDF DLLIATPDMM
PKVAKLGRVL GPRGLMPNPK AGTVTTDLEA AIKEFKAGKL EFRADRTGIV HVRFGKASFS
ADALLQNLKT LQETIDRNKP SGAKGRYWKS LYVTSTMGPS VEVDFSALQD IEQGS
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