| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_2458 |
|---|
| Symbol | rbgA |
|---|
| ID | 3737862 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | - |
|---|
| Start bp | 2264838 |
|---|
| End bp | 2265704 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637777047 |
|---|
| Product | ribosomal biogenesis GTPase |
|---|
| Protein accession | YP_382745 |
|---|
| Protein GI | 78213966 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1161] Predicted GTPases |
|---|
| TIGRFAM ID | [TIGR03596] ribosome biogenesis GTP-binding protein YlqF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCACCC CAACGATCCA GTGGTACCCC GGCCACATCG CCAAGGCGGA GCAGCAGCTC
AAACGCCATC TCGACAAGGT TGATCTGGTG ATTGAGGTGC GTGATGCCCG CATCCCTCTC
GCCACGGGGC ATCCCCATCT CAATCGTTGG TTGAAGGGCA AACAGCATCT GTTGGTCATC
AACCGGCGCG ACATGGTCAC CGCGGCGGCC AAGGAGGCCT GGGAGGCCTG GTTCAAGGCT
CAGGGTCAGA AGACGGTTTG GTGTGATGCC AAGGCCGGAA CCGGCGTGAA GCAGGTGCAG
CAGGCCGCGA TTCGTGCCGG CGACCAGCTC AACGAACGCC GCCGCAACCG GGGCATGCGG
CCCAGGCCGG TGCGAGCCCT CACTCTGGGA TTCCCCAACG TGGGTAAGTC GGCCCTGATC
AACCGTCTTG TGCGGCAGAA GGTGGTGGCC AGTGCCCGGC GGGCAGGGGT GACGCGCACC
CTGCGCTGGG TGCGTCTGGG ACAAGACCTC GATCTCCTGG ATGCCCCTGG CGTGCTGCCG
CCTCGGCTCG ATGACCAGCA GGCGGCCCTG CGGCTGGCCC TTTGCGACGA CATCGGCCAG
GCCGCCTACG ACGGTGAGCT GGTGGCCCAG GCCTTCCTGC AGTTGCTGCT GGATGTGGAA
TCCCAGGCTG CAGCTGGCGT GACGATTCCG CTGCTGCAGG AGCGCTACGG CATTCCCCTT
AGCGGTGAAA CGGCCGACCC CGCCTTTTGG CTGGATGCCG CAGCAGCCCG CCACACCTCC
GGTGAGACAG CGCGCATGGC CCAGCGGTTG CTGGATGATT TCCGTAAATC CGCCCTCGGC
AGCATCGCCC TGGAGCTGCC GGCATGA
|
|---|
| Protein sequence | MSTPTIQWYP GHIAKAEQQL KRHLDKVDLV IEVRDARIPL ATGHPHLNRW LKGKQHLLVI
NRRDMVTAAA KEAWEAWFKA QGQKTVWCDA KAGTGVKQVQ QAAIRAGDQL NERRRNRGMR
PRPVRALTLG FPNVGKSALI NRLVRQKVVA SARRAGVTRT LRWVRLGQDL DLLDAPGVLP
PRLDDQQAAL RLALCDDIGQ AAYDGELVAQ AFLQLLLDVE SQAAAGVTIP LLQERYGIPL
SGETADPAFW LDAAAARHTS GETARMAQRL LDDFRKSALG SIALELPA
|
|---|
| |