| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_2457 |
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| Symbol | |
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| ID | 3737861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9605 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007516 |
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| Strand | - |
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| Start bp | 2263840 |
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| End bp | 2264841 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637777046 |
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| Product | ribosomal large subunit pseudouridine synthase D |
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| Protein accession | YP_382744 |
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| Protein GI | 78213965 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCCGC ATTGGAAACG TCCTCCGCTG CCGGAGGAGA CCTTCACGGA TCGCTTTGGC
GAAGGGGAGG GCGAGCTGTT GACGCTGGCC TATCCCAAGC CGTTGCCGAT GCGGCTGGAC
CGCTGGCTGG TAAGCCAGCG CACCGAGCAG AGCCGCGCCC GGATTCAGAA GTTCATCGAC
GCGGGCTATG TGCGCGTCAA CGGCAAGACC GGCAAGGCCA AAACACCCCT GCGCCAGGGC
GATGAGGTGC AGCTCTGGAT GCCGCCACCG GAACCGCTGC CGTACCTCAA GCCGGAGCCG
ATGGATCTGG ATGTGTTGTT TGAGGACGAC CATCTGATCG TGCTCAACAA GCCAGCCGGA
CTGACGGTGC ATCCGGCGCC AGGCAACAAG GACGGCACAC TGGTGAATGG CCTGCTGCAT
CACTGCCCCG ACCTGCCCGG CATCAGCGGC AAGCTGCGGC CTGGGATCGT GCACCGCCTT
GATAAAGACA CCACCGGCTG CATCGTGATT GCCAAGAGCC AGGAGGCCCT GGTGCGGCTG
CAGGTTCAGA TCCAGAAACG AATCGCCTCC CGCGAGTATT TCGCGGTCGT TCATGGCGTG
CCCGGCGGTG ATTCCGGCAC GATCGTCGGC GCCATTGGCC GTCATCCGGC GGATCGCAAG
AAGTACGCGG TGGTGAGCAG CGAAAACGGT CGGTATGCAT GCACCCACTG GACCCTGGTG
GAGCGTCTTG GCGACTACTC CCTGTTGCGC TTCAAGCTCG ACACCGGACG GACCCATCAG
ATCCGGGTTC ACTGCGCCCA CATGAATCAC CCCGTGGTTG GGGACCCCAC CTACAGCCGC
TGTCGCAAAT TGCCGATCGA GCTGCCTGGT CAGGCCCTGC ATGCCGTGCA GTTGGGGCTC
GACCATCCGA TCACCCGAGA GCGGATGATG TTTGAAGCCC CCCTGCCGCC GGTGATGGAG
AAGTTGCTGG GAGTGTTGAG ACGTCGCGCC GCGTCGGGCT GA
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| Protein sequence | MSPHWKRPPL PEETFTDRFG EGEGELLTLA YPKPLPMRLD RWLVSQRTEQ SRARIQKFID
AGYVRVNGKT GKAKTPLRQG DEVQLWMPPP EPLPYLKPEP MDLDVLFEDD HLIVLNKPAG
LTVHPAPGNK DGTLVNGLLH HCPDLPGISG KLRPGIVHRL DKDTTGCIVI AKSQEALVRL
QVQIQKRIAS REYFAVVHGV PGGDSGTIVG AIGRHPADRK KYAVVSSENG RYACTHWTLV
ERLGDYSLLR FKLDTGRTHQ IRVHCAHMNH PVVGDPTYSR CRKLPIELPG QALHAVQLGL
DHPITRERMM FEAPLPPVME KLLGVLRRRA ASG
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