Gene Syncc9605_2455 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_2455 
Symbol 
ID3737859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp2259841 
End bp2262117 
Gene Length2277 bp 
Protein Length758 aa 
Translation table11 
GC content62% 
IMG OID637777044 
Productmetal dependent phosphohydrolase 
Protein accessionYP_382742 
Protein GI78213963 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases 
TIGRFAM ID[TIGR00691] (p)ppGpp synthetase, RelA/SpoT family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.293722 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCTGCG CGTTGCCCGA AGTCAGGCGT CATCCGATCC GTCATCCAGA CGACTACGGC 
ATCGCTCTGC CTGAGTGGTT GAGGGAGTGC ATCGCCAATG TGCCCCCCGG CATTGGCCAG
AGCTGCCCCA CCGATGCCGA GGCGTTGCTG GTGTCGGCCT TTGATTTCGG CTTTCAGCTC
CACGAGGGAC AGTTCAGGGC CAGTGGAGAC CCCTACATCG TCCATCCGGT GGCGGTGGCT
GATCTGTTGC GTGACATCGG TGCCAGTGCT CCGGTCATCG CTGCGGGGTT CCTCCATGAC
GTGGTCGAAG ACACCGACGT CACCCCCGAT CAGATCGAGC TGCACTTCGG TTCCGAGGTG
CGTGAACTGG TGGAGGGGGT CACCAAGCTC GGCGGTATCC ACTTCAACGA CCGCACGGAA
GCTCAGGCGG AGAATCTGCG GCGAATGTTC CTGGCGATGG CCAGCGACAT CCGTGTGGTG
TTGGTGAAGC TGGCCGACCG CTTGCACAAC ATGCGCACCC TGGGTGCGTT GAAGGAAGAG
AAGCGTCAGC GGATCGCCCG CGAAACCCGC GAGATCTATG CCCCCCTCGC CAACCGCCTC
GGCATCGGCC GCTTCAAGTG GGAGCTTGAG GATCTGGCCT TCAAATTGCT GGAACCGGAG
GCCTTCCGCG AGATTCAGGA GGAGGTGGCC ACCAAGCGCA GCGAGCGTGA GCAACGCCTT
GGCGTCACGG TGGGGCTGCT GAACGAGCGG CTGGAACGGG CTGGCCTAGA CCACTGTGAG
GTGAGTGGTC GCCCCAAACA TCTGTTTGGC ATCTGGAGCA AGATGCAGCG CCAGCAGAAG
GAGTTCCACG AGATCTACGA CGTGGCGGCG TTGCGGATCC TTACCCCCAA TGTCGAGAGC
TGCTACCGCG CCCTCGCGGT GGTTCACGAC ACCTTCCGCC CGATTCCCGG TCGCTTCAAG
GACTACATCG GGTTGCCGAA ACCCAACGGC TATCAATCCC TGCACACGGC GGTGATCGGT
CGGCATCGCC CGATCGAGGT GCAGATCCGC ACGCTTGAGA TGCATCATGT GGCCGAATTC
GGGATTGCGG CCCACTGGAA ATACAAGGAA GGCGGCTCAC CGGCCAGCAG CAGCAGTGAT
GCGGAGCGGT TCAACTGGCT GCGGCAGCTG GTGGATTGGC AACAGGAAGG CGGAAACGAC
GATCACAACG ACTACCTCTC CTCGATCAAG GAAGACCTCT TCGACGAAGA GGTGTTTGTG
TTCACCCCAA AAGGTGATGT GCTCGGTTTG CGCAAGGGGG CAACCGCCGT CGACTTCGCT
TATCGCATCC ACTCCGAGGT GGGCAACCAC TGCCATGGCG TTCGCATCAA CGATCGGCTG
TGTCCGCTGC CGACGCCGCT GCAGAACGGT GATTTCGTTC GGGTGCTCAC CAGCAAGACG
GCCCACCCCA GCCTCGATTG GCTGAACTTC GTCGCCACGC CGACGGCCCG CAATCGCATT
CGCCAGTGGT ACAAGCGCAG CCATCGAGAC GAAACGATTG AACGGGGTAA GGATCTGCTG
GAGCGGGAGC TGGGCCGTGA TGGTTTCGAT GCCTTGCTGA ATAGTGAGGC GATGCAGCGG
GTGGCGCAGC GCTGCAATGT GCCAACCACC GAAGACCTTC TGGCGTCATT GGGATTTGGA
GACGTCACGC TGCAGCAGGC GCTCAACCGT TTGCGCGAGG AGATGCGTCT GCTGGCGGAG
CAGCAGCAGG CCCCTCCCAG CAACGAAGAC GTGGCCGCGG CGTTGGTGCC ATCGCGGGAT
CCGGCGGCGG ACCGTTCCGT TGGCGCAGGG GCGATTCTAG GGCTGGAGGG CTTGGACTAC
CGCCTTGGTG GCTGCTGCAG TCCGTTGCCG GGTGAGTTGA TCGTGGGCAC TGTTGCCCTC
GGTAACCATG GCATCACCAT TCACCGGCAG GACTGCTCCA ACGTAGAGAC GATTCCGCGG
GAACGGCGGC TTCCCGTGCG CTGGAACACC GCCCACGCCG AACAGGAGAA ACAGCGTTTC
CCGGTGCAGC TGCGAATCGA GGTGATCGAT CGCGTTGGCA TCCTCAAAGA CATTCTGCTG
CGTCTCTCCG ATGGGGCCAT CAACGTCAGT GATGCTCGGG TGACCACCGC CGCTGGCAAG
CCGGCCCGCA TTGATCTCCG GGTTGAGTTG GAGGGTGCCG ATCAGCTCAG CCGCACCATG
GATCAGATCC GCTCGATGGC GGATGTGATC GGGATTGCCC GGGTGGGCAC GAGCTAG
 
Protein sequence
MGCALPEVRR HPIRHPDDYG IALPEWLREC IANVPPGIGQ SCPTDAEALL VSAFDFGFQL 
HEGQFRASGD PYIVHPVAVA DLLRDIGASA PVIAAGFLHD VVEDTDVTPD QIELHFGSEV
RELVEGVTKL GGIHFNDRTE AQAENLRRMF LAMASDIRVV LVKLADRLHN MRTLGALKEE
KRQRIARETR EIYAPLANRL GIGRFKWELE DLAFKLLEPE AFREIQEEVA TKRSEREQRL
GVTVGLLNER LERAGLDHCE VSGRPKHLFG IWSKMQRQQK EFHEIYDVAA LRILTPNVES
CYRALAVVHD TFRPIPGRFK DYIGLPKPNG YQSLHTAVIG RHRPIEVQIR TLEMHHVAEF
GIAAHWKYKE GGSPASSSSD AERFNWLRQL VDWQQEGGND DHNDYLSSIK EDLFDEEVFV
FTPKGDVLGL RKGATAVDFA YRIHSEVGNH CHGVRINDRL CPLPTPLQNG DFVRVLTSKT
AHPSLDWLNF VATPTARNRI RQWYKRSHRD ETIERGKDLL ERELGRDGFD ALLNSEAMQR
VAQRCNVPTT EDLLASLGFG DVTLQQALNR LREEMRLLAE QQQAPPSNED VAAALVPSRD
PAADRSVGAG AILGLEGLDY RLGGCCSPLP GELIVGTVAL GNHGITIHRQ DCSNVETIPR
ERRLPVRWNT AHAEQEKQRF PVQLRIEVID RVGILKDILL RLSDGAINVS DARVTTAAGK
PARIDLRVEL EGADQLSRTM DQIRSMADVI GIARVGTS