| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_2453 |
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| Symbol | trmE |
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| ID | 3737857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9605 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007516 |
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| Strand | - |
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| Start bp | 2257964 |
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| End bp | 2259316 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637777042 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_382740 |
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| Protein GI | 78213961 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCAGCA CCGACACGAT TGCGGCAGTG GCCACCGCCG TGGCCCCAGG CCAGGGCGGG
ATCGCGGTGA TTCGTCTCTC CGGGCCGGCT GCGGAAGCGA CGGGGCGCAG CGTGGTGCAT
TGCCCGGGCC GACAGGAGTG GGGATCGCAC CGGGTGGTGT ACGGCCATGT GATCGATAGC
GAGGGCCGCC GTCTCGATGA GGTGCTGCTG CTGCTGATGC GCGGGCCCCG CAGCTTCACC
GGTGAGGACG TGGTGGAGAT CCACTGCCAC GGCGGGGTGA TCGCCGTGCA GCGGGTGCTC
GAAAAGGTGC TGCGGCAGCC GGGGGTGCGC CGGGCCCAGC CGGGCGAGTT CAGCCAGCGG
GCCGTGCTCA ACGGCCGGCT CGATCTCACC CGCGCCGAGG CGGTGAGTGA GCTGGTGGCG
GCCCGCAGCC GCCGGGCGGC CGAGTTGGCC ATGGCGGGCC TCGATGGCGG CATTCAGGCC
GAGATCACGG TGCTGCGGGA ACGGCTGCTC GATCAGCTCA CCGAACTGGA GGCTCGGGTG
GATTTCGAGG AGGACCTGCC GCCCCTCGAT GGCGAGGCCC TGCTGCAGCA GCTGCAAGCC
GTGCGTCTGG AGCTTCAGCA GTTGGTGCGC GATGGCGAGC GGGGCGATGC CCTGCGCCAG
GGCCTGCGGG TGGCCCTGGT GGGTCGCCCC AACGTGGGAA AAAGTTCCCT GCTCAATCGG
CTCAGCCGCC GTGAGCGGGC GATCGTGACC GATCTGCCGG GCACCACGCG GGATCTGCTG
GAGAGCGAGA TCGTGCTGGA GGGGGTGCCG ATCACCCTGC TCGACACCGC CGGCATCCGC
AGCACTGATG ATGCGGTGGA GCAGCTGGGG ATTGCCCGCA GCGAGCAAGC GCTGGCCACC
GCGGATGTGG TGCTGTTGGT GCTCGATGGC CATGCGGGCT GGACCGCCGA AGACGCCGCC
TTGCTGGCGC GCATCCCCGC GCAGATCCCC AGGATCCTGG TGGCCAACAA GGCCGATCTC
CCTGCAGGGG CGTTCCCTCA GCCGGTGGAT GTTCAGCTGT CGGCGTTGGA GGGCATGGGG
GAGGCCGACC TGGTGCAGGC CCTGCTGGAG CGTTGCGGCG CTGCAGGCAC CGACGGCATG
TTGGTGGCGC TGAACCAACG CCAACGCGAT CTGGCGGCCA GGGCGGCCGA GGCCCTGGCC
CGCAGCCAGG AGGTGGCGGC CCAGCAGCTG CCCTGGGACT TCTGGACCAT CGACCTGCGG
GAGGCGATCC GCGCGCTGGG GGAGATCACC GGGGAAGAAC TCACCGAAGC GGTGCTCGAT
CGGGTGTTTT CGCGCTTCTG CATCGGAAAA TAG
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| Protein sequence | MPSTDTIAAV ATAVAPGQGG IAVIRLSGPA AEATGRSVVH CPGRQEWGSH RVVYGHVIDS
EGRRLDEVLL LLMRGPRSFT GEDVVEIHCH GGVIAVQRVL EKVLRQPGVR RAQPGEFSQR
AVLNGRLDLT RAEAVSELVA ARSRRAAELA MAGLDGGIQA EITVLRERLL DQLTELEARV
DFEEDLPPLD GEALLQQLQA VRLELQQLVR DGERGDALRQ GLRVALVGRP NVGKSSLLNR
LSRRERAIVT DLPGTTRDLL ESEIVLEGVP ITLLDTAGIR STDDAVEQLG IARSEQALAT
ADVVLLVLDG HAGWTAEDAA LLARIPAQIP RILVANKADL PAGAFPQPVD VQLSALEGMG
EADLVQALLE RCGAAGTDGM LVALNQRQRD LAARAAEALA RSQEVAAQQL PWDFWTIDLR
EAIRALGEIT GEELTEAVLD RVFSRFCIGK
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