Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_2442 |
Symbol | prfB |
ID | 3737846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | + |
Start bp | 2248492 |
End bp | 2249562 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637777031 |
Product | peptide chain release factor 2 |
Protein accession | YP_382729 |
Protein GI | 78213950 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1186] Protein chain release factor B |
TIGRFAM ID | [TIGR00020] peptide chain release factor 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAGGA CTGTCTTTGA CGTTCCTGCA CTGAACGCCA GGCAACAAGA TCTCGAACAA CTCGCGGCCC AGCCCGATTT CTGGGATGAC CAGCAGAACG CCCAGAAGCA GATGCGGCGT CTGGATGAGG TGAAGGCCCA GCTGTCTCAG CTGGGCGGAT GGCGCGGTGC TGTCGACGAC GCCCAGGCCA CCCTTGAGCT TTACGAGCTA GAGCCGGATG AGGACCTACT GCAGGAGGCT CAGAACGGGT TGAATCAGCT GCGTCAGGGG CTGGACCGTT GGGAGCTGGA GCGCCTGCTC AGCGGCGAAT ACGACAAAGA GGGTGCCGTG CTCAGCATCA ATGCAGGGGC CGGCGGAACG GATGCCCAGG ACTGGGCCCA GATGCTGCTG CGCATGTACA CCCGCTGGGC AGAAGACCAC GGCATGAAGG TGACCGTGGA CGAACTCTCC GAAGGGGAGG AAGCCGGGAT CAAGAGCTGC ACGATCGAGA TCGAAGGTCG CTACGCCTAC GGCTACCTGC GCAACGAAAA GGGCACCCAC CGCTTGGTGC GCATCTCACC GTTCAACGCC AATGACAAGC GCCAGACCAG CTTTGCCGGT GTGGAGGTGA TGCCCAAGAT CGAGGAGGAG GTCAAGCTCG ATATTCCTGA AAAGGACCTG GAGATCACCA CCAGCCGCTC GGGCGGCGCG GGTGGCCAGA ACGTGAACAA GGTGGAAACG GCTGTGCGCA TCCTGCACAT CCCAACCGGG CTGTTTGTGC GCTGCACCCA GGAGCGCTCC CAGCTCCAGA ACAAGGAGAA AGCGATGGCG TTGCTGATGG CCAAGCTGCT GGTGATCGCC CAGGAGCAAC GGGCGGCCGA AATCGCCGAC ATCCGCGGCG ACATCGTTGA AGCGGCCTGG GGCAACCAGA TCCGCAACTA CGTTTTTCAG CCATACCAAA TGGTGAAAGA CCTGCGCACC AATGAAGAAA CCAACGATGT GCAAGCGGTG ATGGATGGGG CCCTCGACCC GTTCATCGAC GCCTCTTTGC GCCAGGGTGT AGAGAGTCCG GGCGCCGATG CCGATTCCTG A
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Protein sequence | MPRTVFDVPA LNARQQDLEQ LAAQPDFWDD QQNAQKQMRR LDEVKAQLSQ LGGWRGAVDD AQATLELYEL EPDEDLLQEA QNGLNQLRQG LDRWELERLL SGEYDKEGAV LSINAGAGGT DAQDWAQMLL RMYTRWAEDH GMKVTVDELS EGEEAGIKSC TIEIEGRYAY GYLRNEKGTH RLVRISPFNA NDKRQTSFAG VEVMPKIEEE VKLDIPEKDL EITTSRSGGA GGQNVNKVET AVRILHIPTG LFVRCTQERS QLQNKEKAMA LLMAKLLVIA QEQRAAEIAD IRGDIVEAAW GNQIRNYVFQ PYQMVKDLRT NEETNDVQAV MDGALDPFID ASLRQGVESP GADADS
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