Gene Syncc9605_2442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_2442 
SymbolprfB 
ID3737846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp2248492 
End bp2249562 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content61% 
IMG OID637777031 
Productpeptide chain release factor 2 
Protein accessionYP_382729 
Protein GI78213950 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID[TIGR00020] peptide chain release factor 2 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAGGA CTGTCTTTGA CGTTCCTGCA CTGAACGCCA GGCAACAAGA TCTCGAACAA 
CTCGCGGCCC AGCCCGATTT CTGGGATGAC CAGCAGAACG CCCAGAAGCA GATGCGGCGT
CTGGATGAGG TGAAGGCCCA GCTGTCTCAG CTGGGCGGAT GGCGCGGTGC TGTCGACGAC
GCCCAGGCCA CCCTTGAGCT TTACGAGCTA GAGCCGGATG AGGACCTACT GCAGGAGGCT
CAGAACGGGT TGAATCAGCT GCGTCAGGGG CTGGACCGTT GGGAGCTGGA GCGCCTGCTC
AGCGGCGAAT ACGACAAAGA GGGTGCCGTG CTCAGCATCA ATGCAGGGGC CGGCGGAACG
GATGCCCAGG ACTGGGCCCA GATGCTGCTG CGCATGTACA CCCGCTGGGC AGAAGACCAC
GGCATGAAGG TGACCGTGGA CGAACTCTCC GAAGGGGAGG AAGCCGGGAT CAAGAGCTGC
ACGATCGAGA TCGAAGGTCG CTACGCCTAC GGCTACCTGC GCAACGAAAA GGGCACCCAC
CGCTTGGTGC GCATCTCACC GTTCAACGCC AATGACAAGC GCCAGACCAG CTTTGCCGGT
GTGGAGGTGA TGCCCAAGAT CGAGGAGGAG GTCAAGCTCG ATATTCCTGA AAAGGACCTG
GAGATCACCA CCAGCCGCTC GGGCGGCGCG GGTGGCCAGA ACGTGAACAA GGTGGAAACG
GCTGTGCGCA TCCTGCACAT CCCAACCGGG CTGTTTGTGC GCTGCACCCA GGAGCGCTCC
CAGCTCCAGA ACAAGGAGAA AGCGATGGCG TTGCTGATGG CCAAGCTGCT GGTGATCGCC
CAGGAGCAAC GGGCGGCCGA AATCGCCGAC ATCCGCGGCG ACATCGTTGA AGCGGCCTGG
GGCAACCAGA TCCGCAACTA CGTTTTTCAG CCATACCAAA TGGTGAAAGA CCTGCGCACC
AATGAAGAAA CCAACGATGT GCAAGCGGTG ATGGATGGGG CCCTCGACCC GTTCATCGAC
GCCTCTTTGC GCCAGGGTGT AGAGAGTCCG GGCGCCGATG CCGATTCCTG A
 
Protein sequence
MPRTVFDVPA LNARQQDLEQ LAAQPDFWDD QQNAQKQMRR LDEVKAQLSQ LGGWRGAVDD 
AQATLELYEL EPDEDLLQEA QNGLNQLRQG LDRWELERLL SGEYDKEGAV LSINAGAGGT
DAQDWAQMLL RMYTRWAEDH GMKVTVDELS EGEEAGIKSC TIEIEGRYAY GYLRNEKGTH
RLVRISPFNA NDKRQTSFAG VEVMPKIEEE VKLDIPEKDL EITTSRSGGA GGQNVNKVET
AVRILHIPTG LFVRCTQERS QLQNKEKAMA LLMAKLLVIA QEQRAAEIAD IRGDIVEAAW
GNQIRNYVFQ PYQMVKDLRT NEETNDVQAV MDGALDPFID ASLRQGVESP GADADS