| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_2412 |
|---|
| Symbol | |
|---|
| ID | 3737375 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | - |
|---|
| Start bp | 2222424 |
|---|
| End bp | 2223545 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637777001 |
|---|
| Product | NADH dehydrogenase subunit H |
|---|
| Protein accession | YP_382699 |
|---|
| Protein GI | 78213920 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGAGTC CGGGACTGGA CTTGGAATTG AGCTTTAGCC AGGCACTGCA AGGGTTTGGC
TTCTCCCCGG AGGTGGCGAG GCTGCTGTGG CTGCCGCTGC CGATGCTGCT AGTTCTGGTG
GCTGCAGTGG TGGGTGTGCT GGTTTCGGTG TGGCTGGAAC GCAAGATTTC CGCCGCTGTC
CAGCAGCGAA TCGGTCCGGA GTATGCCGGT GCCCTGGGTG TGCTTCAGCC CCTGGCCGAC
GGCCTCAAGT TGCTGGTCAA GGAAGACATC ATTCCGGCGC GGGCCGACAG CCTGCTGTTC
ACCCTCGGCC CGGTGCTGGT GGTGGTGCCG GTGATCATCT CCTGGCTGAT CATTCCCTTC
GGCCAGAACC TGCTAATCAG CAATGTGGGC GTAGGGATCT TCCTCTGGAT CTCCTTCAGC
AGCATTCAGC CGATCGGCCT GTTAATGAGT GGCTATGCCT CCAACAATAA GTATTCGCTG
CTCGGGGGAC TGCGGGCCGC AGCTCAATCG ATCAGCTACG AAATTCCCCT GGCTCTGGCG
GTACTGGCCA TCGTGATGAT GACCAACTCG CTGAGCACTG TTGACATCGT CGGTCAGCAG
ACAGGTGCCG GCATCTTGAG CTGGAACATC TGGCGTCAGC CGGTGGGCTT CCTGATTTTC
TGGATCTGTG CCCTGGCCGA GTGTGAGAGG CTTCCCTTCG ACCTTCCCGA AGCTGAGGAA
GAGCTGGTCG CGGGTTACCA GACCGAGTAC GCGGGCATGA AATTTGCCCT CTTCTACCTG
GCGGGTTACA TCAACCTGGT GCTCTCTGCC GTTCTGGTCA GCGTTTTGTA TCTCGGTGGC
TGGGGCTTCC CGATTCCTGT GGAGTGGCTC GCCGGCTGGC TGAACCAGCC CATCGATGCC
CCCTTGGTGC AGGTGATCAC GGGCACCGTT GGCATCGTGA TGACGGTTCT CAAGGCTTAT
CTGCTGGTGT TCGTGGCGAT CCTGCTTCGC TGGACCACCC CCCGCGTCCG TATTGACCAG
CTGCTCGATC TGGGCTGGAA GTTCCTGCTG CCCCTGTCCC TGGTGAACCT TCTGGTGACA
GCAGCCCTCA AGCTCGCTTT CCCCGTTGCA TTCGGCGGCT AA
|
|---|
| Protein sequence | MVSPGLDLEL SFSQALQGFG FSPEVARLLW LPLPMLLVLV AAVVGVLVSV WLERKISAAV
QQRIGPEYAG ALGVLQPLAD GLKLLVKEDI IPARADSLLF TLGPVLVVVP VIISWLIIPF
GQNLLISNVG VGIFLWISFS SIQPIGLLMS GYASNNKYSL LGGLRAAAQS ISYEIPLALA
VLAIVMMTNS LSTVDIVGQQ TGAGILSWNI WRQPVGFLIF WICALAECER LPFDLPEAEE
ELVAGYQTEY AGMKFALFYL AGYINLVLSA VLVSVLYLGG WGFPIPVEWL AGWLNQPIDA
PLVQVITGTV GIVMTVLKAY LLVFVAILLR WTTPRVRIDQ LLDLGWKFLL PLSLVNLLVT
AALKLAFPVA FGG
|
|---|
| |