| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_2400 |
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| Symbol | |
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| ID | 3737363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9605 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007516 |
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| Strand | + |
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| Start bp | 2211473 |
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| End bp | 2213482 |
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| Gene Length | 2010 bp |
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| Protein Length | 669 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637776989 |
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| Product | NAD(P)H-quinone oxidoreductase subunit F |
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| Protein accession | YP_382687 |
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| Protein GI | 78213908 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTCGG CCGAGGAACT CGCCTGGCTC ATTCCCGTTC TGCCCCTGTT CGGCGCCGTG
CTGACCGGGC TGGGGTTGAT CAGCTTCAAC CGCACGATCA ACCGGTTGCG CAAACCCGTT
GCGCTGCTGT TGATCTCTTG TGTTGGTGCA GCTGCGGCCC TCAGCTACAG CATCCTGTTC
AACCAGCTCA ATGGCGCCCC GCCGGTCGAG CATCTGTTCG TCTGGGCCAG TGCCGGCAGC
TTCATTCTGC CGATGGGCTA CGTGGTGGAT CCGCTTGGGG CGGTGATGCT GGCGCTGGTC
ACCACCATCG CCCTGCTGGT GCTGGTGTAT TCCCACGGCT ACATGGCCCA CGACAAGGGC
TATGTGCGCT TCTTCACCTA CCTGGCGCTG TTCAGCAGCT CAATGCTGGG GTTGATCATC
AGCCCCAATC TCCTCGAGAT CTACGTCTTC TGGGAGCTGG TGGGCATGTG CTCCTATCTG
CTGGTGGGCT TCTGGTACGA CCGTGATGGC GCCGCCCACG CCGCCCAGAA AGCCTTTGTG
GTGAACCGGG TGGGTGACTT CGGCCTGCTG CTGGGCATCC TTGGCCTGTT CTGGGCCACC
GGCAGCTTCG ATTTTCAGGG AATCGCCGAT GGCTTGCAGA ACGGCCTGGC CGCCGGAACC
GTGGCGCCAT GGGCCGCGCT GCTGCTCTGC CTGCTGGTGT TCATGGGTCC CATGGCCAAG
TCGGCCCAGT TCCCTCTCCA CGTCTGGCTC CCCGATGCCA TGGAGGGCCC GACGCCGATT
TCGGCGCTAA TTCACGCCGC CACGATGGTG GCCGCAGGGG TGTTCCTGGT CGCCCGCCTC
GATCCCCTCT ACGCCCAGTT CCCCGTCGTT CAAACCGTGA TCGCTGTCGT TGGCACGATC
ACCTGCTTCC TGGGAGCCTC CATTGCCCTC ACCCAGATGG ATCTCAAGAA GGGTCTGGCC
TACAGCACCG TCTCCCAGCT CGGTTACATG ATGCTGGCGA TGGGTTGCGG CGCCCCGGTC
GCCGGCATCT TCCACCTGGT GACCCATGCC TTCTTCAAGG CGATGTTGTT CCTGGGATCA
GGCTCCGTCA TTCACGCCAT GGAGGAGGTG GTGGGCCACG AGCCCGTTCT CGCCCAGGAC
ATGCGCCTGA TGGGAGGCCT GCGCAAGAAG ATGCCCGTCA CCTCGATCAC CTTCTTCATC
GGCTGCATCG CCATCAGCGG CATTCCGCCC CTGGCCGGCT TCTGGAGCAA GGACGAAATT
CTTGGTCAGG CCTTCAACAG CTACCCGCTG CTTTGGGTGG TGGGCTTCCT GACGGCGGGG
ATGACGGCCT TTTACATGTT CCGCCTCTAT TTCCTCACCT TTGAAGGGGA GTTCCGCGGC
AACGACACCG CCATGCAGGC CCAGCTGCTG AGCGCAGCCG GAAAGGATCC TTCCGAGCAC
CACGCCCATG GCGGCAGCGT GCATGAATCG GCCTGGCCAA TGGCGGCCCC CTTGGCGGTG
CTGGCGGTGC CTTCTGTGCT GATTGGCCTG CTGGGCACCC CCTGGAACAG CCGATTCGCA
GGCCTTCTCA ATCCCGAAGA AGCCCTCGAG ATGGCCGAAC ATTTCAGCTG GGGCGAGTTT
CTGCCTCTGG CGAGCGCCTC CGTCGCCATC TCCGTTGCCG GCATCACCCT GGCTGTTCTG
GCCTATGCCC TGCGTCAAAT TGATCTGGGG CAGCTGGTGG CAGGTCGCTT CCCGGCGATG
AATGCCTTCC TCGCCAACAA GTGGTACCTC GATGTGGTGA ACGAGAAGCT GTTCGTTCGC
GGCAGCCGCA AACTGGCCCG CGAGGTGCTC GAGGTGGACG CCAAGGTAGT GGATGGCGTG
GTCAACCTCA CCGGACTGCT CACCCTCGGC AGCGGAGAAG GTCTCAAATA TCTCGAGACC
GGACGGGCCC AGTTCTATGC CCTGATCGTG TTTGCCGGCG TGATCGGCTT GGTGGTGCTG
TTCGGCGTGA TCGGCGGACC AATCGCTTAA
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| Protein sequence | MPSAEELAWL IPVLPLFGAV LTGLGLISFN RTINRLRKPV ALLLISCVGA AAALSYSILF
NQLNGAPPVE HLFVWASAGS FILPMGYVVD PLGAVMLALV TTIALLVLVY SHGYMAHDKG
YVRFFTYLAL FSSSMLGLII SPNLLEIYVF WELVGMCSYL LVGFWYDRDG AAHAAQKAFV
VNRVGDFGLL LGILGLFWAT GSFDFQGIAD GLQNGLAAGT VAPWAALLLC LLVFMGPMAK
SAQFPLHVWL PDAMEGPTPI SALIHAATMV AAGVFLVARL DPLYAQFPVV QTVIAVVGTI
TCFLGASIAL TQMDLKKGLA YSTVSQLGYM MLAMGCGAPV AGIFHLVTHA FFKAMLFLGS
GSVIHAMEEV VGHEPVLAQD MRLMGGLRKK MPVTSITFFI GCIAISGIPP LAGFWSKDEI
LGQAFNSYPL LWVVGFLTAG MTAFYMFRLY FLTFEGEFRG NDTAMQAQLL SAAGKDPSEH
HAHGGSVHES AWPMAAPLAV LAVPSVLIGL LGTPWNSRFA GLLNPEEALE MAEHFSWGEF
LPLASASVAI SVAGITLAVL AYALRQIDLG QLVAGRFPAM NAFLANKWYL DVVNEKLFVR
GSRKLAREVL EVDAKVVDGV VNLTGLLTLG SGEGLKYLET GRAQFYALIV FAGVIGLVVL
FGVIGGPIA
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