Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_2394 |
Symbol | |
ID | 3736635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 2206247 |
End bp | 2207155 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637776983 |
Product | phytoene synthase |
Protein accession | YP_382681 |
Protein GI | 78213902 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1562] Phytoene/squalene synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCTCG CCTCCCCGGA TCTCGACGCA GCCTTTGAGG CCTGCCGTCG GGAGACCGCC GAGTGGGCCA AGACGTTCTA TATCGGCACC TTGCTTCTCC CTCCAGAGAA GCGGCGTGCC ATCTGGGCGA TTTATGTGTG GTGCCGGCGC ACCGATGAAC TGATGGACAG CCCGGAGGCC CAGGCGCGTC CGGTTGAAGA ACTTGCTGAG CGGCTCGACC GCTGGGAGGA GAAGACCCGT GCTCTTTTTG ATGGCCGGGT GGAGGATGAC CTGGATGCGG TGATGGTGGA CACCCTGGAG CGCTTTCCCC AGGGCATACA GCCCTATCTC GACATGATTG AGGGCCAGCG GATGGACCTC ACCTGGACCC GTTACCCCCG CTTTGAAGAC CTCAAGCTCT ATTGCTATCG CGTGGCAGGC ACTGTTGGCT TGATGACCCA GGGGGTGATG GGTGTCGACC AGGCCTACAC CTCAGCCCCC TGGAGCGACT GTCCCGACAC TTCCGATGCC GCCGTCTCCC TGGGGATCGC CAACCAACTC ACCAACATCC TCCGGGATGT GGGGGAAGAC CGGGGCCGTG GTCGTATCTA TCTGCCGCAG GAAGATCTCG AGCGTTTCGG CTATTCCGAG GAGGAGTTGA TGGCTGGAAC CCTCAACACC GCCTGGCGTG CGTTGATGCG CTTTCAGCTG GAGCGGGCCC GCGATTGGTT TGCTCGCTCC GAAGCAGGAG TCCGTTGGCT GTCTGCCGAT GCGCGCTGGC CGGTGTGGAC GTCGCTTCGG CTCTACCGCG GCATCCTGGA TGAAATCGAG CGGGTCGATT ACGACGTGTT CAATCACCGT GCCTACGTGG CCAAGGTCAA CAAGCTGCTT GATCTGCCCC GTTCATTCCT GTTGGCTCAG TCACGCTAA
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Protein sequence | MPLASPDLDA AFEACRRETA EWAKTFYIGT LLLPPEKRRA IWAIYVWCRR TDELMDSPEA QARPVEELAE RLDRWEEKTR ALFDGRVEDD LDAVMVDTLE RFPQGIQPYL DMIEGQRMDL TWTRYPRFED LKLYCYRVAG TVGLMTQGVM GVDQAYTSAP WSDCPDTSDA AVSLGIANQL TNILRDVGED RGRGRIYLPQ EDLERFGYSE EELMAGTLNT AWRALMRFQL ERARDWFARS EAGVRWLSAD ARWPVWTSLR LYRGILDEIE RVDYDVFNHR AYVAKVNKLL DLPRSFLLAQ SR
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