| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_2392 |
|---|
| Symbol | |
|---|
| ID | 3736633 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | + |
|---|
| Start bp | 2204489 |
|---|
| End bp | 2205682 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637776981 |
|---|
| Product | poly A polymerase family protein |
|---|
| Protein accession | YP_382679 |
|---|
| Protein GI | 78213900 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCAAG GCTCCGGCGA CGCGTTACTT GACCAGCTGC GAGAGCGACT GGCGCCAGCC
CAGTGGCCTC TCCCCCTGGC ACGGCTGCCG GAGGGCACGG CGCTGGTGGG TGGCGCCGTG
CGGGATGGCT TGCTGAACCG TCTCCAGGAG CAGCCGGATC TTGACCTGGT GGTCCCATCT
GATGCCATCG CCCTGACCAA GGCCTTGGCC CAGGAGCTCG ATGGCACCTG TGTGGTGCTG
GACGCAGAAC GGAACATTGC TCGGCTGGTG CTTGGGGGCT GGACGGTTGA CATCGCCCGG
CAGGACGGAG ACCGCATCGA AGACGACCTC TGGCGGCGCG ACTACCGGCT CAATGCCATC
GCCGTGTCGC TCCAACCCTG GGGAGAGCTG TGGGATCCCA CAGGGGGACT GAATGACCTC
CAGCAGGGGT GCCTGACCGC CGTCTCGCAA GCCAACCTCA TCGACGATCC TCTGCGGCTG
CTGCGGGGAT TGCGGCTGAT GGCGGAAATC CCGCTAACCA TCACCAGCCA GACCATGGGC
TGGATTGAGC GCCACGCCGC ACGGCTTCCG GAAGCAGCGC CGGAGCGGAT CCTGGCGGAA
TTGCAGCGAC TGGTGCGGGG CAAGCATGCT GACGCCGCGA TTGCAGCCCT CAGGAGCCTG
CCGTTGCTGC ATCCCTGGGC GGCCGCAGGG CAACCTCCCA CGCCCGGCAA CACGGAAGGC
CTGAGCAGCG AGGAAACCGC AGCAGCAGTG CCCTTGGCAC GGCTGACGGC CCTGGTGAGC
GATGAGGGCC TCAAGCAACT CCGGGCCAGT CGCGCTCTAC GCCAACGCTG CAAACGGCTG
CGGAGCTGGC AGCAACGCAC CGGTCAGGCA CCGGAGTCGC TATCCGAGAA CGATCAACTC
CGATTGCACG AGGAGCTGGA AGGGGATCTC CCCGCCTTGG CCCTGCAACT GCCCATGCCC
GAGAAAGGGA TCTGGCTGCG GCGATGGCGC GACGCTGAGG ACCCTCTCTT CCACCCCAGA
ACTCCAATCG ACGGCAACGG CCTGCTCACG GCCCTGAAGG TCGAACCCGG GCCCCGTCTC
GGACGCCTGC TGCATCATCT GAAGCTTGAA CATGCCTTTG GGCGCATCCA AACCCCAAGC
GAAGCGCTGA AGGAGGCCCA ACATTTCTTG ACCCGTGAAA GCGAGGCTCT GTGA
|
|---|
| Protein sequence | MAQGSGDALL DQLRERLAPA QWPLPLARLP EGTALVGGAV RDGLLNRLQE QPDLDLVVPS
DAIALTKALA QELDGTCVVL DAERNIARLV LGGWTVDIAR QDGDRIEDDL WRRDYRLNAI
AVSLQPWGEL WDPTGGLNDL QQGCLTAVSQ ANLIDDPLRL LRGLRLMAEI PLTITSQTMG
WIERHAARLP EAAPERILAE LQRLVRGKHA DAAIAALRSL PLLHPWAAAG QPPTPGNTEG
LSSEETAAAV PLARLTALVS DEGLKQLRAS RALRQRCKRL RSWQQRTGQA PESLSENDQL
RLHEELEGDL PALALQLPMP EKGIWLRRWR DAEDPLFHPR TPIDGNGLLT ALKVEPGPRL
GRLLHHLKLE HAFGRIQTPS EALKEAQHFL TRESEAL
|
|---|
| |