Gene Syncc9605_2385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_2385 
Symbol 
ID3736626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp2199106 
End bp2200425 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content63% 
IMG OID637776974 
Productputative glycerol-3-phosphate acyltransferase PlsX 
Protein accessionYP_382672 
Protein GI78213893 
COG category[I] Lipid transport and metabolism 
COG ID[COG0416] Fatty acid/phospholipid biosynthesis enzyme 
TIGRFAM ID[TIGR00182] fatty acid/phospholipid synthesis protein PlsX 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCTCCGA AGGTCCCTGA TCCCACCCCG GCACCTCAGC CGCGGCACAA GACCAACCGT 
CCTCGGGCGA TCCGTCGCCT GGTGATTTGG TACCGGCGCA ACGCCGCCGT AACAACCATC
GTTGATGGTG CTGCCAACTC AGCGACGGCA GCTGGCTCGA TGGCAGGCAC CGTGGCAGAA
ACCGTTGTGT CGGGAGCCGG GACGGTGGCC AGCAGCGTGC TCCAACCGCT GGGGTTCGAT
CCCCTGCGCT GGCTGCAGGG GGGCACCGAT ACCGATGAGA TCGACGATGC AAAGCGTCTC
TGGGTGGCCG TCGATGGCAT GGGTGGTGAC CATGCGCCGG GGCCGATCCT GGAGGGATGC
CTGGACGCCA TTGACCGGCT GCCACTGAAG ATCCGCTTCG TGGGGGAAAT CGAACGGGTG
ATGGCCGCCG CCAACAGCCT GGGCCTGCGC GAAGCCTTGG AGACTGCGCG GGCCGCCGGA
CATCTGGATC TGGTGGCCAG TGGCCCCTCC ATCGGCATGG ATGACGAGGC CACGGCGGTG
CGGCGCAAAC GGGACGCCAG CATCAATGTG GCCATGGACC TCGTGAAGAA AGGCAAGGCC
GAGGCGGTGT ACTCCGCCGG CAATTCCGGT GCGGTGATGG CTTCGGCGAT TTTTCGGCTG
GGACGGCTGA AGGGCATCGA CCGCCCCGCC ATCGGTGCCC TTTTCCCCAC CAAGGATCCA
GGCAAACCGG TCTTGGTGCT CGATGTGGGG GCCAACATGG ATTGCAAACC CACCTTCCTG
CACCAGTTCG CCCTGCTGGG GAACATCTAC AGCCGGGACG TACTTCAGGT GAAACGCCCA
CGCATCGGGC TGCTGAACAT TGGCGAGGAA GAGTGCAAGG GGAACGATCT CTCCCTGAAG
ACCCACGAAT TGCTGCGGGA CGAATCCAGG CTCCACTTCG CAGGCAACTG CGAAGGCCGG
GATGTGCTGT CGGGCGATTT TGATGTGGTG GTCTGCGATG GGTTCACCGG CAATGTGCTG
CTGAAGTTCC TGGAGTCCGT CGGCAGTGTT CTGCTGGGAG TGCTACGGGC GGAGTTACCC
CGAGGGCGTC GCGGCAAGGT TGGATCAGCG TTTTTACGCA GCAACCTCAA ACGCATCAAG
AAGCGACTCG ACCATGCCGA GCACGGTGGT GCTCTGCTGC TGGGCGTGAA CGGCATTTCC
GTCATCGGCC ACGGCAGCAG CAAGGCCCTC TCGGTGGTCA GTGCCTTGCG CATTGCCCAC
TCCGCAGCCA GCCATGGGGT GATGGAGGAT CTCGCCAAGC TGCAACAGGG TTGTGATTGA
 
Protein sequence
MPPKVPDPTP APQPRHKTNR PRAIRRLVIW YRRNAAVTTI VDGAANSATA AGSMAGTVAE 
TVVSGAGTVA SSVLQPLGFD PLRWLQGGTD TDEIDDAKRL WVAVDGMGGD HAPGPILEGC
LDAIDRLPLK IRFVGEIERV MAAANSLGLR EALETARAAG HLDLVASGPS IGMDDEATAV
RRKRDASINV AMDLVKKGKA EAVYSAGNSG AVMASAIFRL GRLKGIDRPA IGALFPTKDP
GKPVLVLDVG ANMDCKPTFL HQFALLGNIY SRDVLQVKRP RIGLLNIGEE ECKGNDLSLK
THELLRDESR LHFAGNCEGR DVLSGDFDVV VCDGFTGNVL LKFLESVGSV LLGVLRAELP
RGRRGKVGSA FLRSNLKRIK KRLDHAEHGG ALLLGVNGIS VIGHGSSKAL SVVSALRIAH
SAASHGVMED LAKLQQGCD