Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_2367 |
Symbol | |
ID | 3736531 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 2178101 |
End bp | 2179603 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637776955 |
Product | porin |
Protein accession | YP_382654 |
Protein GI | 78213875 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTTT TCCAGCAACT GCTGGTGGCT CCCGCCGCCC TTGGCCTTCT GGCCACCGGC GCCAATGCCG CCGAGCTGAA CATCAACGGC GTTTCTGATT ACGCGGCTTC CGCTGATCAG GTCACCAGCG TCACCCAATT CTCTGACGTT TACCCCACCG ACTGGGCCTA TCAGGCTCTG GCCAACCTGG TGGAGACCTA CGGCTGCGTC GCCGGCTACC CCAACGGCAC TTTCCGTGGC AACCGGGCGA TGACCCGCTA CGAAGCGGCT GCCCTGCTGA ACGCCTGCCT CGACCGGATC ACTGAAGTGA CCGACGAGCT GCGTCGCCTG CTCAAGGAAT TCGAAACCGA GCTGGCCATC CTCAAGGGTC GCGTTGACGG CCTCGAGGCC CGCGTCGGCG AACTGGAAGC AACCCAGTTC TCCACCACCA CCAAGCTGAA AGCCAAGGCT GACTGGGCCT TCGGTGCTGC TACTGCTTGG GATAAGGGTA GCAAGGCATT CAAAGCTGAA AGCGGTGGTA CTTCCTTCAG CTACAACCTC GCGCTGAACC TGGAGACCTC CTTCACCGGT GAGGATCTCC TCTACACCCG ACTTCGTTCG GGCAACATGG ACAACGTCTA CGGCGGACTG TTCTCCCAGG AGTACGGCTT CGACTCTGGC AACACCGTCA AGATTGCCCG TTTGTACTAC AGCTTCCCCC TCGGTGACGA GTTCACCGTG GTTGGTGGCC CTCGCGTCCG TCAGGACGAC ATGCTGCCGG TCTGGCCCAG CGCTTATCCC GCTGCCATGA CGTATGACTT CTTCACCTAT GCCGGCGTGC CTGGTGCTTA CAACCTGGCT CTCGGCGCTG GTGCTGGTAT CTACTGGTCG TCCAACGACT TCAGCATTTC CACCAGCTAC CTTTCAACTG ACGGTAACTC CAGCGACCCC AACACGGGTG GCATGTTTAC TGATGGTGCT GGTGCAAATG CCACTACTCA GATCGCTTAT GCGCCTGAGA ACTGGGGCAT CGCTGCCGCA TACACCTATG CATCTGGTGC TGAAGGTGGC GGATCCCTCT ACATCGGAAA TGCCACAGCT GGTGCTGCAG CGGCTTCTGC AGCTGATAAC AGCAACTCTT TTGGCATCAG TGCATGGTGG ATGCCCGAGG AATCTGGAAT CATTCCTTCC GTCAGCACCG GTTATGGCGG AACTTTCGTT GAGTACCTGA GCGACGACGT TTACACCAAT TCCTGGTACG TCGGACTTGA GTGGAGCGAT GCATTCATCG AAGGCAACTC CCTCGGTTTC GCTGTCGGTC AGCCCACCTG GATTGCACAA TCCGATGATG GTGATCTGAA CGAAGCAGCT GGTTTCGCTT ACGAGCTCTT CTACAAGTTC CAGGTCACCG ACAACATCTC TGTCACTCCT GCGCTCACCT ACCTGAGCAA GCCCTTCCCC GAGCAGGGCT CCAACGGCAT GAGTGCCTTC AGCGGTCTGA TCAAGACCCA GTTCAAGTTC TGA
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Protein sequence | MKLFQQLLVA PAALGLLATG ANAAELNING VSDYAASADQ VTSVTQFSDV YPTDWAYQAL ANLVETYGCV AGYPNGTFRG NRAMTRYEAA ALLNACLDRI TEVTDELRRL LKEFETELAI LKGRVDGLEA RVGELEATQF STTTKLKAKA DWAFGAATAW DKGSKAFKAE SGGTSFSYNL ALNLETSFTG EDLLYTRLRS GNMDNVYGGL FSQEYGFDSG NTVKIARLYY SFPLGDEFTV VGGPRVRQDD MLPVWPSAYP AAMTYDFFTY AGVPGAYNLA LGAGAGIYWS SNDFSISTSY LSTDGNSSDP NTGGMFTDGA GANATTQIAY APENWGIAAA YTYASGAEGG GSLYIGNATA GAAAASAADN SNSFGISAWW MPEESGIIPS VSTGYGGTFV EYLSDDVYTN SWYVGLEWSD AFIEGNSLGF AVGQPTWIAQ SDDGDLNEAA GFAYELFYKF QVTDNISVTP ALTYLSKPFP EQGSNGMSAF SGLIKTQFKF
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