Gene Syncc9605_2363 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_2363 
Symbol 
ID3736527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp2172382 
End bp2174448 
Gene Length2067 bp 
Protein Length688 aa 
Translation table11 
GC content66% 
IMG OID637776951 
Producthypothetical protein 
Protein accessionYP_382650 
Protein GI78213871 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCAGC GCTGGCGTTT CTGGGCTTCG GTTGCCTTGA TCTGGGTGCT CTCCACCCTG 
GTGGATCGGC TCTGGTGGAC GCTGCAGACC GGGGTTCCCG CCTGGGATCA GGCCGACTAC
CTCAACAGCG CCATGGACCA TGGCCGCGCC TTGGGCCTGC TTCCCGGTGG CGGTTGGCAG
GGTTGGCAGG CGTTGCTGGA TCTCTCGCCG AAGATTCCGC CCCTGGCCTC GCTGGTGAAC
GGCAGCGTGA TGGCCCTGAG TGGTGATGCC CCGGAGCAAG CGGCCTGGAG CTTGAGCCTC
TGGCACGGTT TGCTTCTGAT GGTGATGGCG GGCTGGGGAC GACGGCTGCA GGGGGATGGC
CTGGCCTTGA TCGCCTGCCT GTTGGCGGCA TTGACGCCGG CTTTTCTGGA TCTGCGCACG
GACTACGTGC TGGAGATGGC CCTGGTGGCG TGTTGCAGTC TGGCGATCTG GCGTCTCGGG
GTCTGGTGCG ATCCGAAGAG CGGTGGCCGC TGGAGGCAGG CCTGGTGTTG CACCCTGGCA
GCCATCGCTG CGGTGCTGGT GAAGCAAAGC GCCCTGCTTG TGCTTGTGCC TGGGGGACTC
TGGGCTGCGG GATTGGCGTT GCGGCGGGGA GGCCCTTGGT TGCGGCAAGC CCTGCTGCTA
CCTGTGCTCA TGGCGGCGTT AATTGGTCCC TGGTTGCGTC ACAACTGGAT CACTAGCCTC
GGCGGCACCA ACCGGGCCGT GTTCGAGTCG GCGGCCCTGG AAGGGGATCC TGGCGTGCTC
AGTCTGGCCA GTTGGTTGTG GTACCCGCGC TTGTTGCCGG AGCAGCTCGG CAGCGTTCTG
TTGCTGGTGG GGTTGTCGGG GCTGCTGCTT TGGTGCTGGC AGCGTCAGCA GCACTCCAGC
GATCACTCCT GGTCCTGGCG CTGGCTCCTG ATCAATTTGG TGGCGGCCTG GGTGCTCACC
ACGTTGAGCC CCAACAAAGG CGACCGCTAC ATCGCTCCCC TGCTCCCCTC TCTGCTTTTG
CTCTTGGCCC GTGGGTGGTG GCAATGGGGC TACTGGTTGG AGGCCAGGCG TTCGAGGCTG
GTGTGGCCCC TATTCGGTGC TGGGCTGCTG GCCTGTGTTC CGGCGGGCTG GGCCCATCAG
CTACATCGCT TTGACGACCG GCCCCGTGGG CCGGTGGAGG CGCTGGTGAA GGCTGCCGGT
GGTGGAGACC CCAGCACGCC TCCCTCCACC TTGATCGTGG TGCCCAGCAC CTCCGATCTC
AACCAGCACA ACGTCAGCTT CTACGGCCGT CGCCACGGGG GGCAGACCGT TGGCCGGCAG
CTGGGGGGCA GCCGCCAGGA CCGTGAGCCA GTGCTGGCTC GGGCTGAATG GGTGGTGTTG
GCGGAAGGGA ACCAGGGATC AGTGCGCAAA GCGGCGCGAA AGCTGGATCA AGCCGTGCGC
AGCAGCGGTG TGTTCGAGCC ATTGCATCAA TTTGAGCGCC CCAAGGGGGG GAGTTATTCC
CTCTGGCGCC GCCGCGCGAC GCATCCGATT GCAGGCCCTT CCTTTGCGCA GCGCTTCCCC
GTCCTCGCCG CTGGCCTGGC GGCAGGGCCG CTGGGGCTGG ATCCGGTGTT CGCTGCGGTG
GGGCAGGAGC ACATGCTCGA TGGCCATTTC AGCTACCGGG ATCCGGTGCG TTCTGAGGCC
TTGGCGGCCT TGGCGCAGGA TCCCGATGCT GTGCAACCGC GTTGGACCCT TGCTCTGCTG
GCGGTGCTGG GAAACCGCCC CTCGCAGGCG TCAGAGCAGT TCGAGGTCTT GCAACGGCTG
TTGCCCGATA ACCCCTGGCC AGCGGCCTAC CGCAGTGTGG TCAACCTTGC AGGGTGGAAT
CCCTGGCAGG CCGCCGCTGC TGCGGATGGC GCCAGTGTTT CGAATCCTGT GCTGGCGGCG
CTGGGGGATC TCAGCGGTGT GCTCTCCGGT GCTGTTTGGC GCATCCCTGC CGCCAGCACC
TCAGTCCCAG CGGCCATCAC AGCCGTGGAG GAGGCCCTGG AGCCTGCCTC CAACCAAGAT
CAAGATCAGG AGCAGGCTTC CAGCTGA
 
Protein sequence
MKQRWRFWAS VALIWVLSTL VDRLWWTLQT GVPAWDQADY LNSAMDHGRA LGLLPGGGWQ 
GWQALLDLSP KIPPLASLVN GSVMALSGDA PEQAAWSLSL WHGLLLMVMA GWGRRLQGDG
LALIACLLAA LTPAFLDLRT DYVLEMALVA CCSLAIWRLG VWCDPKSGGR WRQAWCCTLA
AIAAVLVKQS ALLVLVPGGL WAAGLALRRG GPWLRQALLL PVLMAALIGP WLRHNWITSL
GGTNRAVFES AALEGDPGVL SLASWLWYPR LLPEQLGSVL LLVGLSGLLL WCWQRQQHSS
DHSWSWRWLL INLVAAWVLT TLSPNKGDRY IAPLLPSLLL LLARGWWQWG YWLEARRSRL
VWPLFGAGLL ACVPAGWAHQ LHRFDDRPRG PVEALVKAAG GGDPSTPPST LIVVPSTSDL
NQHNVSFYGR RHGGQTVGRQ LGGSRQDREP VLARAEWVVL AEGNQGSVRK AARKLDQAVR
SSGVFEPLHQ FERPKGGSYS LWRRRATHPI AGPSFAQRFP VLAAGLAAGP LGLDPVFAAV
GQEHMLDGHF SYRDPVRSEA LAALAQDPDA VQPRWTLALL AVLGNRPSQA SEQFEVLQRL
LPDNPWPAAY RSVVNLAGWN PWQAAAAADG ASVSNPVLAA LGDLSGVLSG AVWRIPAAST
SVPAAITAVE EALEPASNQD QDQEQASS