Gene Syncc9605_2345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_2345 
SymbolaroK 
ID3736491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp2159661 
End bp2160260 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content62% 
IMG OID637776933 
Productshikimate kinase 
Protein accessionYP_382632 
Protein GI78213853 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTACA GCGGTTTCCG AGTCATGGCG GATTCCACCC CAACCCTTAA GAAACGCCTC 
AGCGGGCGCA GCCTGTATTT GGTGGGAATG ATGGGCAGCG GCAAGACGAG CACGGGCCGC
CCCCTGGCCG AACGCCTGGG CTACGGCTTT GTGGATGCCG ATGCCGTGAT CGAACAGGCG
GCGGGCTGCA GCATCCCGGA GATCTTTGAG CGGGATGGCG ATGCAGGCTT CCGCAGCCTG
GAAAGCCAGG TGCTTAGTGC GATCAGCCAG CGCCATTCCC TTGTGGTGGC CACCGGAGGA
GGTGTGGTGA CCCAGCCTGA AAACTGGGGA TTGCTGCACA GCGGCATCGT GATCTGGCTC
GATGTGGTTC CCGATCAGTT GCTGCAGCGG CTGAACGCCG ACAGCACCGT GCGTCCGCTG
CTGCAGACCA CTGATCCAGA AGCGTCTCTC AACGCGCTGT TGAACGAGCG CCGTCCCCTC
TACAGCGAAG CCGACCTCAC GGTGGTGATC AACGACGAAA CTCCAGAGGC TGTCGCTGAC
GGGATCCTGC AACTGCTGCC GAGCCTGCTG CAGGATCCGA CCCAACGCCG AACCGACTGA
 
Protein sequence
MSYSGFRVMA DSTPTLKKRL SGRSLYLVGM MGSGKTSTGR PLAERLGYGF VDADAVIEQA 
AGCSIPEIFE RDGDAGFRSL ESQVLSAISQ RHSLVVATGG GVVTQPENWG LLHSGIVIWL
DVVPDQLLQR LNADSTVRPL LQTTDPEASL NALLNERRPL YSEADLTVVI NDETPEAVAD
GILQLLPSLL QDPTQRRTD