Gene Syncc9605_2342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_2342 
Symbol 
ID3736488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp2156800 
End bp2157975 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content61% 
IMG OID637776930 
Producthypothetical protein 
Protein accessionYP_382629 
Protein GI78213850 
COG category[S] Function unknown 
COG ID[COG3146] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTCAC TCACGGCCCG CTGGCATCGC TCCATCAACG AGATCCCAGA GCAGCAGTGG 
AACAGCCTGG TGGGAGTCGA TACGATCCCT TTTTACCGCT GGAGCTGGCT GGAGGCTTTG
GAAAGCTCAG GCAGCATCAT TCCCGAGCAG GGCTGGCAGC CCCTGCATCT GGCCCTCTGG
CGTGAAGACA CTCTGATTGC GGTGGCTCCG CTGTTCCTGA AGGGCCACAG CTATGGCGAG
TTCGTGTTCG ACCAGACCTT TGTCCGTCTG GCGGCGGATC TGGGGCTGCG CTACTACCCC
AAGCTTTTGG GCATGAGTCC GGTCAGTCCC GTGCTGGGCT ACCGCTTCCA TGTGCGATCT
GGAGAGGATG AGGCTCTGCT CACCAGGGAG TTGCTGCGGG CGATCGATCG CTTCTGCGAA
CAGAACGGCA TCCTCAGCTG CAATTTCCTC TACGTAGATC CGCAGTGGCG ACCTCTGGCG
GAGGCCGCCG GTTGTGCCGC CTGGCTGAAC CAGCAAAGCC TGTGGAGCCG CGGTGACGAC
CAGACGTTTG AGGATTACCT CAAGGGCTTC AATGCCAACC AGCGCCGCAA CATCAAGCGT
GAACGCAAGG CCGTGGCCAA AGCCGGGATC ACCGTGACAC CCCTCAGCGG CGACCAGCTG
GACCTGGAGC TGTTGCAGAC CATGCATCGT TTCTACGAGC AGCACTGTGC TCGCTGGGGA
CCGTGGGGCA GCAAGTACCT GGAGGAGGGC TTTTTTAAAG CCTTGGCACG GCTGCACCGC
GACCAGCTGG TGCTCTTTTC TGCCCACCGC GGTGACCCGC GCGATCCGGT GGCGATGTCG
ATGTGCGTGC AGGACGGCCG TCAGCTCTGG GGCCGCTACT GGGGCAGCCA CGAGGAGGTT
GATTGTCTTC ACTTCGAAGT CTGTTACTAC GCTCCGATCG AATGGGCTCT GGCCAATGGC
ATCGTCTGTT TTGACCCTGG AGCCGGTGGT AGCCACAAAC GCCGCCGAGG TTTTGTGGCC
CGTCCCCACG CCAGCCTGCA CCGCTGGTAC CAGCCCCAGA TGGATCAACT AATCCGCACC
TGGTTGCCCA AGGTGAATGG CTTAATGCTG GAGGAGATCG AGGCGATCAA TGCGGAGCTG
CCCTTCAAAG CGGAACCTCC GGCCTTGGCT TTGTAG
 
Protein sequence
MTSLTARWHR SINEIPEQQW NSLVGVDTIP FYRWSWLEAL ESSGSIIPEQ GWQPLHLALW 
REDTLIAVAP LFLKGHSYGE FVFDQTFVRL AADLGLRYYP KLLGMSPVSP VLGYRFHVRS
GEDEALLTRE LLRAIDRFCE QNGILSCNFL YVDPQWRPLA EAAGCAAWLN QQSLWSRGDD
QTFEDYLKGF NANQRRNIKR ERKAVAKAGI TVTPLSGDQL DLELLQTMHR FYEQHCARWG
PWGSKYLEEG FFKALARLHR DQLVLFSAHR GDPRDPVAMS MCVQDGRQLW GRYWGSHEEV
DCLHFEVCYY APIEWALANG IVCFDPGAGG SHKRRRGFVA RPHASLHRWY QPQMDQLIRT
WLPKVNGLML EEIEAINAEL PFKAEPPALA L