Gene Syncc9605_2338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_2338 
Symbol 
ID3736691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp2152021 
End bp2153250 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content60% 
IMG OID637776925 
Productputative multidrug efflux MFS transporter 
Protein accessionYP_382625 
Protein GI78213846 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACCTTC ATTTGCTGTC GCGAAAGCGG CAGCGTCAGC TCTTCCTACT GACGTCCGGC 
ATCAGCACAG CTGGATCCTT CGCCGGCATC ACCGCCAAGG GCTGGATTCT TCTGGATGGC
ATGGGTGGGC CACTGGTATT GGCCTTGAAC TTCGCGGCAC TTTCCCTGCC GAGCCTGCTG
GTGAGCGGAG TCGCCGGGGT TCGCACCGAC AGGCTGGGAT GCGAGCGGAT GCTGATCCAA
GCGCAATGGG GGTTATTGGC GGCGGCAATG CTGGGCGCGC TGGCGATCCC TCTGCTCGAT
GGTCAAGCCC AGGTACTGAT GTTGCTCGTC AGCACCTTGC TCATGGGCGT TGCGGGCTCC
TTCGAATCCA CGGCCCGCAA CAAGTACTGC GCCCTAATCA TTGATAAACC CGACCAATTG
GTGACCTACC TCACCAGCTT TTCGGTCGTG TTCAACGTCG GCAAGTTGGT GGGTCCTCCG
ATCGGTGGCT GGCTTGTCGC TCTCAAGGGT CCGTCCTGGG CCCTAGGAAT TGACGCAGCC
AGCTACCTGC TGCCGATTGC GACGGTTCTG TTTCTGTTAC ATCCCGATCG GTACCGGGAA
CAACGCAGTA ACGATGGAGA ACAGGGGAGC TTGCTGACGG CCTGGCGGCA AAGCGGATCC
ACCCTGCGAG GAGTGCTGAG CCTGACAGCC GTGTTGTGTC TGGTGGGCTT TTTCCACCCG
GGGCTGGCTC CGTTGATGGC CGAAGCGATT CTTGGATCGG ATCCCCGTGA CCTCGGGATC
TTCACCAGCG TGCTGGCGGC GGGGAGCATA AGCGGTGGTC TGGTGTTGCA ACGCAACAGC
GCACGCTTTT GTCGTTCGCC TTTTCTGACG ATTGGCGGGT TCGGACTGAT CACAGCGATC
GCCCAACTCG GCATGGCGGC ATCAACGGAC GTGTCCGTGA GCCTGGCGAT GGCCTTTTTG
ATCGGTGCAG GGACAGCAGG CTTACTCAGC AGTTGCAACC TGATAACCCA AGTGGGTGCC
CCACAGGTCA TCCGAGGACG AATGGGTGGA CTGAGTCAGA TCGCCTTCCT CGGCGGTGGT
GGCCTCAGCG GTCTACTTGC AGCAATGTTG GTTCTCGCAA CCAACCTGAC AACGACCTAT
GCCCTGACAG GCGGAGTCGG TGTGGTGCTG GCTGTGCTGT GGATCTGGAA ACGAGGTCGG
CAGAGGCTTG AGCCGATCAG ATCAACATGA
 
Protein sequence
MNLHLLSRKR QRQLFLLTSG ISTAGSFAGI TAKGWILLDG MGGPLVLALN FAALSLPSLL 
VSGVAGVRTD RLGCERMLIQ AQWGLLAAAM LGALAIPLLD GQAQVLMLLV STLLMGVAGS
FESTARNKYC ALIIDKPDQL VTYLTSFSVV FNVGKLVGPP IGGWLVALKG PSWALGIDAA
SYLLPIATVL FLLHPDRYRE QRSNDGEQGS LLTAWRQSGS TLRGVLSLTA VLCLVGFFHP
GLAPLMAEAI LGSDPRDLGI FTSVLAAGSI SGGLVLQRNS ARFCRSPFLT IGGFGLITAI
AQLGMAASTD VSVSLAMAFL IGAGTAGLLS SCNLITQVGA PQVIRGRMGG LSQIAFLGGG
GLSGLLAAML VLATNLTTTY ALTGGVGVVL AVLWIWKRGR QRLEPIRST